Protein Concepts Dictionary

Tableau information

Concept source:  d3n0sa_  amino acid (a.a.) range (MSE1)(ASP73)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (MSE1)    (THR8) H1
	   (THR13)   (GLY25) H2
	   (THR31)   (SER37) E3
	   (SER37)   (GLY42) H4
	   (ALA48)   (ILE59) H5
	   (GLU62)   (ASP73) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2       67.1°   H2                                 
E3      111.2°  122.9°   E3                          
H4       40.3°   98.1°   73.0°   H4                   
H5       51.2°  -46.3°  160.2°   91.1°   H5            
E6      151.5°  106.5°  -47.1° -119.6°  144.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3n0sa_ :     (MSE1)   (ASP73)   [view usage] : c.140.1.0 |TTHA0583/YokD-like |TTHA0583/YokD-like |automated matches |automated matches |Bacillus anthracis [TaxId: 198094]
 d2nygd_ :     (LEU2)   (PRO69)   [view usage] : c.140.1.2 |TTHA0583/YokD-like |TTHA0583/YokD-like |Aminoglycoside 3-N-acetyltransferase-like |Uncharacterized protein YokD |Bacillus subtilis [TaxId: 1423]
 d3n0mb_ :     (MSE1)   (PRO68)   [view usage] : c.140.1.0 |TTHA0583/YokD-like |TTHA0583/YokD-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d3e4fa_ :     (ASP3)   (PRO68)   [view usage] : c.140.1.0 |TTHA0583/YokD-like |TTHA0583/YokD-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d3n0sb_ :     (MSE1)   (PRO68)   [view usage] : c.140.1.0 |TTHA0583/YokD-like |TTHA0583/YokD-like |automated matches |automated matches |Bacillus anthracis [TaxId: 198094]
 d3n0ma_ :     (ALA0)   (ASP73)   [view usage] : c.140.1.0 |TTHA0583/YokD-like |TTHA0583/YokD-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d3ijwb_ :     (MSE1)   (PRO68)   [view usage] : c.140.1.0 |TTHA0583/YokD-like |TTHA0583/YokD-like |automated matches |automated matches |Bacillus anthracis [TaxId: 198094]
 d3kzlc_ :     (ALA0)   (ASP73)   [view usage] : c.140.1.0 |TTHA0583/YokD-like |TTHA0583/YokD-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d3kzla_ :    (ASN-1)   (PRO68)   [view usage] : c.140.1.0 |TTHA0583/YokD-like |TTHA0583/YokD-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d3n0sc_ :     (ALA0)   (ASP73)   [view usage] : c.140.1.0 |TTHA0583/YokD-like |TTHA0583/YokD-like |automated matches |automated matches |Bacillus anthracis [TaxId: 198094]
 d3ijwa_ :     (ALA0)   (PRO68)   [view usage] : c.140.1.0 |TTHA0583/YokD-like |TTHA0583/YokD-like |automated matches |automated matches |Bacillus anthracis [TaxId: 198094]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.140