Protein Concepts Dictionary

Tableau information

Concept source:  d4oq3b_  amino acid (a.a.) range (PRO32)(LEU107)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO32)   (GLY42) H1
	   (THR49)   (ARG65) H2
	   (HIS73)   (ASN79) E3
	   (ASP80)   (PHE86) H4
	   (PRO89)   (LYS94) E5
	   (HIS96)  (LEU107) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2       65.4°   H2                                 
E3      115.6°   78.1°   E3                          
H4     -148.1° -136.6°  -94.2°   H4                   
E5      -66.3° -119.8°  157.4°   81.8°   E5            
H6     -113.5°  104.9°   31.2°   85.6° -126.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3v3ba_ :    (PRO32)  (LEU107)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
 d3lbka_ :    (PRO32)  (LEU107)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
 d1v31a_ :    (THR16)   (LEU82)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |Hypothetical protein AT5G14170 (rafl11-05-p19) |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d4jrga_ :    (PRO28)  (LEU103)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |African clawed frog (Xenopus laevis) [TaxId: 8355]
 d3lbje_ :    (LEU31)  (LYS104)   [view usage] : a.42.1.0 |SWIB/MDM2 domain |SWIB/MDM2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2lzga_ :    (LEU35)  (ASN106)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
 d3vbga_ :    (PRO32)  (LEU107)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
 d3g03c_ :    (PRO32)  (LEU107)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
 d1z1ma_ :    (PRO32)  (ARG105)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2vyra_ :    (LYS30)  (ASN105)   [view usage] : a.42.1.0 |SWIB/MDM2 domain |SWIB/MDM2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ycqa_ :    (THR27)  (LEU103)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |African clawed frog (Xenopus laevis) [TaxId: 8355]
 d3u15d_ :    (LYS30)  (ASN105)   [view usage] : a.42.1.0 |SWIB/MDM2 domain |SWIB/MDM2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3g03a_ :    (PRO32)  (LEU107)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
 d4ipfa_ :    (PRO28)  (LEU103)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |African clawed frog (Xenopus laevis) [TaxId: 8355]
 d3u15a_ :    (LYS30)  (ASN105)   [view usage] : a.42.1.0 |SWIB/MDM2 domain |SWIB/MDM2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ycra_ :    (PRO32)  (LEU107)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
 d4j3ea_ :    (PRO28)  (LEU103)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |African clawed frog (Xenopus laevis) [TaxId: 8355]
 d4jv7a_ :    (PRO32)  (LEU107)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
 d1ttva_ :    (THR27)  (ASN102)   [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |African clawed frog (Xenopus laevis) [TaxId: 8355]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.42