Protein Concepts Dictionary

Tableau information

Concept source:  d3rrvb_  amino acid (a.a.) range (PHE69)(ALA134)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PHE69)   (SER76) H1
	   (ALA79)   (CYS99) H2
	  (PRO102)  (ASN108) E3
	  (VAL112)  (SER122) H4
	  (ASP123)  (GLU129) E5
	  (ASN130)  (ALA134) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2     -122.2°   H2                                 
E3     -114.9° -116.0°   E3                          
H4       99.4°  -25.4° -141.4°   H4                   
E5     -127.4°  103.8°  -12.7° -129.2°   E5            
E6       -3.3° -121.0°  114.3°  -98.9° -126.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4olqa_ :    (PHE70)  (VAL133)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Hyphomonas neptunium [TaxId: 228405]
 d3fdua_ :    (ASP73)  (ILE140)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Acinetobacter baumannii [TaxId: 400667]
 d3peac_ :    (ASP64)  (LEU130)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
 d3rrvb_ :    (PHE69)  (ALA134)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium avium [TaxId: 1770]
 d4nekb_ :    (LEU66)  (MSE126)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Magnetospirillum magneticum [TaxId: 342108]
 d4olqb_ :    (PHE70)  (VAL133)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Hyphomonas neptunium [TaxId: 228405]
 d3qk8a_ :    (SER71)  (ASP138)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium marinum [TaxId: 216594]
 d4jfca_ :    (ASN72)  (MSE133)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Polaromonas sp. [TaxId: 296591]
 d4nekc_ :    (LEU66)  (MSE126)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Magnetospirillum magneticum [TaxId: 342108]
 d4neka_ :    (LEU66)  (PHE128)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Magnetospirillum magneticum [TaxId: 342108]
 d4kpka_ :    (ASP79)  (LEU147)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Shewanella pealeana [TaxId: 398579]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.14