Protein Concepts Dictionary

Tableau information

Concept source:  d3a4vb_  amino acid (a.a.) range (SER74)(TYR170)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER74)   (ASP80) H1
	   (ASP80)  (HIS102) H2
	  (GLU105)  (PRO110) E3
	  (THR135)  (GLU153) H4
	  (ASP158)  (ARG163) E5
	  (PRO165)  (TYR170) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2     -116.2°   H2                                 
E3      -83.7° -159.1°   E3                          
H4      111.5°  -11.2° -156.9°   H4                   
E5      -91.0°  152.2°   -7.3° -151.9°   E5            
E6     -107.1°   96.3°  -82.9°  107.5°   80.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3a9wb_ :    (SER74)  (TYR170)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Thermoplasma volcanium [TaxId: 50339]
 d1kerb_ :    (HIS87)  (GLY193)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |dTDP-glucose 4,6-dehydratase (RmlB) |Streptococcus suis, serotype 2 [TaxId: 1307]
 d3ajrb_ :    (SER74)  (TYR170)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Thermoplasma volcanium [TaxId: 273116]
 d3a1nb_ :    (SER74)  (TYR170)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Thermoplasma volcanium [TaxId: 50339]
 d3a4vb_ :    (SER74)  (TYR170)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Thermoplasma volcanium [TaxId: 50339]
 d1kepb_ :    (HIS87)  (GLY193)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |dTDP-glucose 4,6-dehydratase (RmlB) |Streptococcus suis, serotype 2 [TaxId: 1307]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2