Protein Concepts Dictionary

Tableau information

Concept source:  d2ph4a_  amino acid (a.a.) range (SER1)(THR120)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (SER1)   (GLY15) H1
	   (ASP39)   (LEU58) H2
	   (TYR73)   (ASN79) E3
	   (ALA81)   (LYS87) E4
	   (PRO90)  (ASN109) H5
	  (ASP114)  (THR120) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2      148.9°   H2                                 
E3       15.0°  138.4°   E3                          
E4     -156.4°   -7.8°  146.1°   E4                   
H5      -31.3°  175.6°  -43.1°  170.4°   H5            
H6     -157.3°  -53.7° -163.7°   46.1° -126.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.9°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1c1ja_ :     (LEU2)  (TYR120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Halys viper (Agkistrodon halys) [TaxId: 8714]
 d1vipa_ :     (LEU2)  (THR127)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Snake phospholipase A2 |Russell's viper (Vipera russelli) [TaxId: 8707]
 d1pwoa_ :     (ASN1)  (ILE118)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Micropechis ikaheka [TaxId: 66188]
 d5p2pa_ :     (ALA1)  (LEU118)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |Phospholipase A2 |Pig (Sus scrofa), pancreas [TaxId: 9823]
 d2ph4a_ :     (SER1)  (THR120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Zhaoermia mangshanensis [TaxId: 242058]
 d2i0ua_ :     (ASN1)  (LEU120)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Vipera nikolskii [TaxId: 110206]
 d3t0ra_ :     (SER1)  (PHE125)   [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Bothrops moojeni [TaxId: 98334]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.133