Tableau information
Concept source: d1ndoe2 amino acid (a.a.) range (PRO158)(HIS213)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: HHEEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO158) (GLY164) H1
(ALA166) (SER177) H2
(GLY179) (PRO185) E3
(PRO185) (ILE191) E4
(ASN194) (GLY204) H5
(ASP205) (HIS213) H6
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 124.5° H2
E3 93.2° 85.8° E3
E4 48.7° 146.7° -64.3° E4
H5 -72.9° 76.1° 143.9° 119.5° H5
H6 -73.5° -64.8° 48.5° 83.6° -95.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2gbwa2 : (SER156) (ALA213) [view usage] : d.129.3.0 |TBP-like |Bet v1-like |automated matches |automated matches |Sphingobium yanoikuyae [TaxId: 13690]
d2hmka2 : (PRO158) (VAL209) [view usage] : d.129.3.3 |TBP-like |Bet v1-like |Ring hydroxylating alpha subunit catalytic domain |Naphthalene 1,2-dioxygenase alpha subunit, C-domain |Pseudomonas sp. [TaxId: 69011]
d1eg9a2 : (PRO158) (VAL209) [view usage] : d.129.3.3 |TBP-like |Bet v1-like |Ring hydroxylating alpha subunit catalytic domain |Naphthalene 1,2-dioxygenase alpha subunit, C-domain |Pseudomonas putida [TaxId: 303]
d2b24a2 : (SER165) (ARG222) [view usage] : d.129.3.3 |TBP-like |Bet v1-like |Ring hydroxylating alpha subunit catalytic domain |Naphthalene 1,2-dioxygenase alpha subunit, C-domain |Rhodococcus sp. [TaxId: 92694]
d1o7ga2 : (PRO158) (VAL209) [view usage] : d.129.3.3 |TBP-like |Bet v1-like |Ring hydroxylating alpha subunit catalytic domain |Naphthalene 1,2-dioxygenase alpha subunit, C-domain |Pseudomonas putida [TaxId: 303]
d2gbwc2 : (SER156) (ALA213) [view usage] : d.129.3.0 |TBP-like |Bet v1-like |automated matches |automated matches |Sphingobium yanoikuyae [TaxId: 13690]
d2hmja2 : (PRO158) (VAL209) [view usage] : d.129.3.3 |TBP-like |Bet v1-like |Ring hydroxylating alpha subunit catalytic domain |Naphthalene 1,2-dioxygenase alpha subunit, C-domain |Pseudomonas sp. [TaxId: 306]
d1ndoe2 : (PRO158) (HIS213) [view usage] : d.129.3.3 |TBP-like |Bet v1-like |Ring hydroxylating alpha subunit catalytic domain |Naphthalene 1,2-dioxygenase alpha subunit, C-domain |Pseudomonas putida [TaxId: 303]
d4ecfa_ : (PHE90) (TRP141) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Lactobacillus brevis [TaxId: 387344]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94, d.129