Protein Concepts Dictionary

Tableau information

Concept source:  d1jwoa_  amino acid (a.a.) range (MET120)(ASP199)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (MET120)  (PHE123) H1
	  (SER128)  (GLN137) H2
	  (LEU143)  (GLU148) E3
	  (ASP155)  (SER161) E4
	  (ASP165)  (ASP175) E5
	  (ASN188)  (ASP199) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2      111.6°   H2                                 
E3      -72.0°  162.6°   E3                          
E4       92.2°  -28.2°  163.9°   E4                   
E5     -113.8°  129.7°  -41.9°  154.0°   E5            
H6      107.5°  -42.2°  154.6°  -27.8°  133.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1pica_ :     (ASP8)   (THR89)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Phosphatidylinositol 3-kinase, p85-alpha subunit |Human (Homo sapiens) [TaxId: 9606]
 d3n84b_ :    (HIS58)  (ARG136)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Growth factor receptor-bound protein 2 (GRB2) |Human (Homo sapiens) [TaxId: 9606]
 d3eaza_ :    (THR75)  (ASP159)   [view usage] : d.93.1.0 |SH2-like |SH2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1csya_ :    (MET13)   (LYS94)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Syk tyrosine kinase |Human (Homo sapiens) [TaxId: 9606]
 d1wqua_ :    (GLN16)   (SER90)   [view usage] : d.93.1.0 |SH2-like |SH2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1k9ad2 :    (MET80)  (THR158)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Carboxyl-terminal src kinase (csk) |Human (Homo sapiens) [TaxId: 9606]
 d3n84d_ :    (HIS58)  (ARG136)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Growth factor receptor-bound protein 2 (GRB2) |Human (Homo sapiens) [TaxId: 9606]
 d3us4a_ :   (MSE120)  (ASP199)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Csk homologous kinase Chk |Human (Homo sapiens) [TaxId: 9606]
 d2iuia_ :     (MET5)   (GLU90)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1jwoa_ :   (MET120)  (ASP199)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Csk homologous kinase Chk |Human (Homo sapiens) [TaxId: 9606]
 d1bfia_ :     (ASP7)   (THR88)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Phosphatidylinositol 3-kinase, p85-alpha subunit |Cow (Bos taurus) [TaxId: 9913]
 d2kk6a_ :    (GLN17)   (LYS94)   [view usage] : d.93.1.0 |SH2-like |SH2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1o41a_ :     (GLU5)   (HIS92)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |c-src tyrosine kinase |Human (Homo sapiens) [TaxId: 9606]
 d3uyoa_ :   (ASN139)  (SER222)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.93