Protein Concepts Dictionary

Tableau information

Concept source:  d1boxa_  amino acid (a.a.) range (GLU14)(LEU91)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HHEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU14)   (SER24) H1
	   (TYR30)   (VAL35) H2
	   (TYR51)   (THR56) E3
	   (ARG68)   (GLU74) E4
	   (GLU78)   (GLY83) E5
	   (ALA87)   (LEU91) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
H2      -65.4°   H2                                 
E3      131.1° -159.9°   E3                          
E4      -34.6°  -32.6°  156.8°   E4                   
E5      143.0°  139.8°  -36.2°  166.0°   E5            
E6      -68.1°  -65.7°  107.1°  -54.2°  139.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1mgwa_ :    (GLN17)   (ARG94)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |Cytotoxic RNase Sa3 |Streptomyces aureofaciens [TaxId: 1894]
 d1boxa_ :    (GLU14)   (LEU91)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |RNase Sa |Streptomyces aureofaciens [TaxId: 1894]
 d1gmpa_ :    (GLU14)   (LEU91)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |RNase Sa |Streptomyces aureofaciens [TaxId: 1894]
 d3a5ea_ :    (GLU14)   (LEU91)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |automated matches |Streptomyces aureofaciens [TaxId: 1894]
 d1ynvx_ :    (GLU14)   (LEU91)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |automated matches |Streptomyces aureofaciens [TaxId: 1894]
 d1t2ia_ :    (GLU14)   (LEU91)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |RNase Sa |Streptomyces aureofaciens [TaxId: 1894]
 d1ay7a_ :    (GLU14)   (LEU91)   [view usage] : d.1.1.2 |Microbial ribonucleases |Microbial ribonucleases |Bacterial ribonucleases |RNase Sa |Streptomyces aureofaciens [TaxId: 1894]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   d.1