Protein Concepts Dictionary

Tableau information

Concept source:  d3nh1a_  amino acid (a.a.) range (SER91)(GLY205)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HEHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER91)  (GLY111) H1
	  (ARG114)  (HIS120) E2
	  (ALA122)  (SER137) H3
	  (ALA152)  (ALA158) H4
	  (LEU164)  (GLY172) H5
	  (SER182)  (GLY205) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
E2      117.9°   E2                                 
H3     -110.7°  129.8°   H3                          
H4       48.9°  -69.2°  158.7°   H4                   
H5       35.5°  -92.2° -123.3°   37.6°   H5            
H6      -21.2°  105.5° -124.6°   38.8°   45.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4kb0b_ :    (SER91)  (GLY205)   [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Escherichia coli [TaxId: 83333]
 d2is3a_ :    (SER91)  (GLY205)   [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d4kb0a_ :    (SER91)  (GLY205)   [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Escherichia coli [TaxId: 83333]
 d3nh1a_ :    (SER91)  (GLY205)   [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Escherichia coli [TaxId: 562]
 d3nh2b_ :    (SER91)  (GLY205)   [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Escherichia coli [TaxId: 562]
 d3nh1c_ :    (SER91)  (GLY205)   [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Escherichia coli [TaxId: 562]
 d3ngyb_ :    (SER91)  (GLY205)   [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Escherichia coli [TaxId: 562]
 d3nh1d_ :    (SER91)  (GLY205)   [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Escherichia coli [TaxId: 562]
 d4kb1b_ :    (SER91)  (GLY205)   [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |automated matches |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.55