Protein Concepts Dictionary

Tableau information

Concept source:  d1ly8b_  amino acid (a.a.) range (SER112)(ASP201)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HEHHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER112)  (CYS128) H1
	  (GLY130)  (GLU135) E2
	  (THR158)  (GLY170) H3
	  (SER172)  (LEU185) H4
	  (ASN192)  (PHE196) H5
	  (PHE196)  (ASP201) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
E2     -154.6°   E2                                 
H3     -120.4°   35.8°   H3                          
H4       63.8° -121.5°  104.0°   H4                   
H5       67.5°  -97.5°  -65.3°   46.8°   H5            
E6      -68.9°   92.0°  -77.9° -125.5°   91.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ly8a_ :   (SER112)  (ASP201)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Fungal peroxidase (ligninase) |Inky cap (Coprinus cinereus) [TaxId: 5346]
 d1ly9a_ :   (SER112)  (ASP201)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Fungal peroxidase (ligninase) |Inky cap (Coprinus cinereus) [TaxId: 5346]
 d1ly8b_ :   (SER112)  (ASP201)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Fungal peroxidase (ligninase) |Inky cap (Coprinus cinereus) [TaxId: 5346]
 d1lyka_ :   (SER112)  (ASP201)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Fungal peroxidase (ligninase) |Inky cap (Coprinus cinereus) [TaxId: 5346]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.93