Protein Concepts Dictionary

Tableau information

Concept source:  d1a8qa_  amino acid (a.a.) range (PHE204)(LEU272)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PHE204)  (PHE211) H1
	  (PRO214)  (GLY220) E2
	  (GLY220)  (PRO227) H3
	  (GLY232)  (ILE238) H4
	  (ALA242)  (GLU248) E5
	  (ASP260)  (LEU272) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
E2     -133.0°   E2                                 
H3      134.5°   91.0°   H3                          
H4      -46.8° -165.7°   93.9°   H4                   
E5      117.0°  -17.4°  104.5° -161.4°   E5            
H6       46.9°  170.8°  -91.8°    5.1°  163.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1zoib_ :   (THR209)  (PHE273)   [view usage] : c.69.1.12 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloperoxidase |automated matches |Pseudomonas putida [TaxId: 303]
 d3u0va_ :   (ALA156)  (LEU229)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1a8qa_ :   (PHE204)  (LEU272)   [view usage] : c.69.1.12 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Haloperoxidase |Bromoperoxidase A1 |Streptomyces aureofaciens [TaxId: 1894]
 d1fq1a_ :    (ASN59)  (TYR133)   [view usage] : c.45.1.1 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Dual specificity phosphatase-like |Kinase associated phosphatase (kap) |Human (Homo sapiens) [TaxId: 9606]
 d1ve6a2 :   (VAL509)  (GLU580)   [view usage] : c.69.1.33 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acylamino-acid-releasing enzyme, C-terminal donain |Acylamino-acid-releasing enzyme, C-terminal donain |Aeropyrum pernix [TaxId: 56636]
 d3jw8b_ :   (ALA233)  (THR304)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1m33a_ :   (LEU188)  (VAL256)   [view usage] : c.69.1.26 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Biotin biosynthesis protein BioH |Biotin biosynthesis protein BioH |Escherichia coli [TaxId: 562]
 d4ke9a_ :   (LEU181)  (HIS248)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Bacillus sp. [TaxId: 129908]
 d2d81a1 :   (SER104)  (GLY194)   [view usage] : c.69.1.37 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |PHB depolymerase-like |Polyhydroxybutyrate depolymerase |Penicillium funiculosum [TaxId: 28572]
 d1lnsa3 :   (TYR449)  (LYS520)   [view usage] : c.69.1.21 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |PepX catalytic domain-like |X-Prolyl dipeptidyl aminopeptidase PepX, middle domain |Lactococcus lactis [TaxId: 1358]
 d3fvtf_ :   (ASP234)  (HIS315)   [view usage] : c.69.1.25 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetyl xylan esterase-like |automated matches |Bacillus pumilus [TaxId: 1408]
 d3hjua_ :   (LYS206)  (ALA297)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4etwa_ :   (ARG189)  (LEU257)   [view usage] : c.69.1.26 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Biotin biosynthesis protein BioH |automated matches |Shigella flexneri [TaxId: 623]
 d3pe6a_ :   (ALA223)  (THR294)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3h86a_ :   (ALA107)  (VAL190)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |automated matches |Methanococcus maripaludis [TaxId: 39152]
 d4ffva2 :   (ALA693)  (CYS763)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3wwoa_ :   (THR190)  (ALA256)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Baliospermum montanum [TaxId: 316758]
 d1q0ra_ :   (PRO226)  (ALA298)   [view usage] : c.69.1.28 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Aclacinomycin methylesterase RdmC |Aclacinomycin methylesterase RdmC |Streptomyces purpurascens [TaxId: 1924]
 d1iunb_ :   (SER205)  (GLU272)   [view usage] : c.69.1.10 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carbon-carbon bond hydrolase |Meta-cleavage product hydrolase CumD |Pseudomonas fluorescens [TaxId: 294]
 d1uxoa_ :   (HIS119)  (LYS187)   [view usage] : c.69.1.31 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |YdeN-like |Hypothetical protein YdeN |Bacillus subtilis [TaxId: 1423]
 d1n1ma2 :   (ALA692)  (SER764)   [view usage] : c.69.1.24 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |DPP6 catalytic domain-like |Dipeptidyl peptidase IV/CD26, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d3cn7a_ :   (ASP150)  (LEU215)   [view usage] : c.69.1.14 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase/thioesterase 1 |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d1fj2a_ :   (GLY154)  (LEU221)   [view usage] : c.69.1.14 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carboxylesterase/thioesterase 1 |Acyl protein thioesterase 1 |Human (Homo sapiens) [TaxId: 9606]
 d4ke9c_ :   (LEU181)  (HIS248)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Bacillus sp. [TaxId: 129908]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.69,    c.45,    c.37