Protein Concepts Dictionary

Tableau information

Concept source:  d3h1vx2  amino acid (a.a.) range (SER360)(ALA460)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER360)  (SER398) H1
	  (ASP400)  (GLY410) E2
	  (SER411)  (HIS416) H3
	  (HIS416)  (THR431) H4
	  (GLU435)  (GLU440) E5
	  (GLU443)  (ALA460) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
E2      134.0°   E2                                 
H3     -124.7°  -93.4°   H3                          
H4      -37.1°  158.8° -106.1°   H4                   
E5      123.3°  -13.9°  -96.8°  156.6°   E5            
H6       24.3° -109.9°  143.2°   58.3°  100.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3zeua2 :   (PRO146)  (GLY205)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Salmonella enterica [TaxId: 909946]
 d1nbwc3 :   (LEU516)  (ALA606)   [view usage] : c.55.1.6 |Ribonuclease H-like motif |Actin-like ATPase domain |ATPase domain of dehydratase reactivase alpha subunit |ATPase domain of the glycerol dehydratase reactivase alpha subunit |Klebsiella pneumoniae [TaxId: 573]
 d1v4sa2 :   (SER360)  (ALA456)   [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Glucokinase |Human (Homo sapiens) [TaxId: 9606]
 d3h1vx2 :   (SER360)  (ALA460)   [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Glucokinase |Human (Homo sapiens) [TaxId: 9606]
 d3f9ma2 :   (SER360)  (LYS458)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4htla2 :   (ALA209)  (GLU290)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Listeria monocytogenes [TaxId: 169963]
 d1czan2 :   (SER364)  (GLU465)   [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Mammalian type I hexokinase |Human (Homo sapiens) [TaxId: 9606]
 d1hkba2 :   (SER364)  (GLU465)   [view usage] : c.55.1.3 |Ribonuclease H-like motif |Actin-like ATPase domain |Hexokinase |Mammalian type I hexokinase |Human (Homo sapiens) [TaxId: 9606]
 d1okja2 :   (LYS144)  (GLY204)   [view usage] : c.55.1.9 |Ribonuclease H-like motif |Actin-like ATPase domain |YeaZ-like |Hypothetical protein YeaZ |Escherichia coli [TaxId: 562]
 d4isfa2 :   (SER360)  (GLY464)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.55