Protein Concepts Dictionary

Tableau information

Concept source:  d1d0ia_  amino acid (a.a.) range (VAL88)(GLY150)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (VAL88)   (THR96) H1
	  (PRO101)  (HIS106) E2
	  (ASN109)  (GLU114) H3
	  (GLU114)  (ALA126) H4
	  (ASP127)  (GLY132) E5
	  (GLY137)  (GLY150) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
E2      157.7°   E2                                 
H3     -159.3°   42.7°   H3                          
H4      -15.7°  170.8° -145.2°   H4                   
E5      137.3°  -21.0°   63.3°  150.0°   E5            
H6      -27.8°  168.9° -131.7°  -19.3°  163.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1d0id_ :    (VAL88)  (ALA151)   [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Streptomyces coelicolor [TaxId: 1902]
 d4rhcf_ :    (VAL85)  (GLN146)   [view usage] : c.23.13.0 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |automated matches |automated matches |Acinetobacter baumannii [TaxId: 400667]
 d1d0ih_ :    (VAL88)  (ALA151)   [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Streptomyces coelicolor [TaxId: 1902]
 d1d0ie_ :    (VAL88)  (GLY137)   [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Streptomyces coelicolor [TaxId: 1902]
 d1aoxa_ :   (VAL266)  (ILE335)   [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin alpha2-beta1 |Human (Homo sapiens) [TaxId: 9606]
 d1gu0a_ :    (VAL88)  (GLY137)   [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Streptomyces coelicolor [TaxId: 1902]
 d3n76a_ :    (VAL84)  (GLU142)   [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d1aoxb_ :   (MET262)  (ILE335)   [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin alpha2-beta1 |Human (Homo sapiens) [TaxId: 9606]
 d3mwfa_ :   (LEU108)  (GLY160)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Staphylococcus aureus [TaxId: 158879]
 d3qa3e_ :   (TYR252)  (LYS315)   [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin alpha M (CR3, CD11b/CD18, Mac-1 alpha subunit) |Human (Homo sapiens) [TaxId: 9606]
 d1d0ia_ :    (VAL88)  (GLY150)   [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Streptomyces coelicolor [TaxId: 1902]
 d3kipi_ :    (VAL86)  (TYR145)   [view usage] : c.23.13.0 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |automated matches |automated matches |Yeast (Candida albicans) [TaxId: 5476]
 d1n3ya_ :   (ILE254)  (ILE317)   [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin alpha-x beta2 |Human (Homo sapiens) [TaxId: 9606]
 d4rhca_ :    (VAL85)  (PRO147)   [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |automated matches |Acinetobacter baumannii [TaxId: 400667]
 d1mhpb_ :   (ARG265)  (PHE336)   [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |Integrin alpha1-beta1 |Norway rat (Rattus norvegicus) [TaxId: 10116]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.92,    c.23,    c.62