Protein Concepts Dictionary

Tableau information

Concept source:  d3pn7c_  amino acid (a.a.) range (GLN5)(LEU75)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLN5)   (GLY23) H1
	   (GLY26)   (PHE31) E2
	   (LYS32)   (GLY41) H3
	   (ASN46)   (VAL52) H4
	   (GLU60)   (PRO64) E5
	   (PRO64)   (LEU75) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
E2       79.1°   E2                                 
H3      136.7°  105.2°   H3                          
H4      -89.2° -126.2°  118.1°   H4                   
E5     -135.7°  144.2°  -46.6°   71.9°   E5            
H6      120.6°   45.0°  -63.5°  135.5°  -99.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3pn7c_ :     (GLN5)   (LEU75)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Placopecten magellanicus [TaxId: 6577]
 d3jtdc_ :     (SER4)   (MET76)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Myosin Regulatory Chain |Bay scallop (Aequipecten irradians) [TaxId: 31199]
 d1kk8c_ :     (GLN5)   (CYS78)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Myosin Regulatory Chain |Bay scallop (Aequipecten irradians) [TaxId: 31199]
 d3ucta_ :     (THR5)   (LYS75)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Human (Homo sapiens) [TaxId: 9606]
 d3i5gc_ :     (THR4)   (SER77)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Todarodes pacificus [TaxId: 6637]
 d1qviz_ :     (SER4)   (CYS78)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Myosin Regulatory Chain |Bay scallop (Aequipecten irradians) [TaxId: 31199]
 d3pn7f_ :     (SER4)   (MET76)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Placopecten magellanicus [TaxId: 6577]
 d1b7tz_ :     (SER4)   (CYS78)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Myosin Regulatory Chain |Bay scallop (Aequipecten irradians) [TaxId: 31199]
 d1kk7z_ :     (SER4)   (CYS78)   [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Myosin Regulatory Chain |Bay scallop (Aequipecten irradians) [TaxId: 31199]
 d2otgc_ :     (GLN5)   (CYS78)   [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Placopecten magellanicus [TaxId: 6577]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.39