Protein Concepts Dictionary

Tableau information

Concept source:  d4odib_  amino acid (a.a.) range (ALA185)(TYR244)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HEHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA185)  (GLY191) H1
	  (ARG193)  (ALA198) E2
	  (GLY200)  (LYS212) H3
	  (SER214)  (GLU220) H4
	  (VAL227)  (LEU233) E5
	  (VAL240)  (TYR244) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
E2     -163.5°   E2                                 
H3      -54.6°  130.6°   H3                          
H4       87.9°  -79.1°  134.8°   H4                   
E5      -60.0°  132.6°   24.7°  147.9°   E5            
E6      111.6°  -56.4° -154.5°  -23.8°  170.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3lnta_ :   (ILE167)  (TYR227)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Burkholderia pseudomallei [TaxId: 320372]
 d1fzta_ :   (VAL149)  (ASP210)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |Phosphoglycerate mutase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
 d4odid_ :   (HIS183)  (TYR244)   [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Toxoplasma gondii [TaxId: 508771]
 d3eznb_ :   (ILE167)  (TYR227)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Burkholderia pseudomallei [TaxId: 320372]
 d3kkkb_ :   (ALA170)  (TYR229)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Plasmodium falciparum [TaxId: 36329]
 d3gp3a_ :   (ILE167)  (TYR227)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Burkholderia pseudomallei [TaxId: 28450]
 d3pgma_ :   (VAL165)  (LEU226)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |Phosphoglycerate mutase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3d8ha_ :   (ILE186)  (TYR246)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Cryptosporidium parvum [TaxId: 353152]
 d3kkka_ :   (ALA170)  (TYR229)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Plasmodium falciparum [TaxId: 36329]
 d1riic_ :   (THR165)  (ASP232)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |Phosphoglycerate mutase |Mycobacterium tuberculosis [TaxId: 1773]
 d3fdza_ :   (ILE167)  (TYR227)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Burkholderia pseudomallei [TaxId: 320372]
 d1t8pa_ :   (ALA174)  (LEU235)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |Phosphoglycerate mutase |Human (Homo sapiens) [TaxId: 9606]
 d1qhfa_ :   (GLN163)  (LEU228)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |Phosphoglycerate mutase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d4odia_ :   (HIS183)  (TYR244)   [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Toxoplasma gondii [TaxId: 508771]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.60