Protein Concepts Dictionary

Tableau information

Concept source:  d1rbob2  amino acid (a.a.) range (TYR20)(PRO104)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HEHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (TYR20)   (TYR25) H1
	   (ILE36)   (GLN45) E2
	   (PRO49)   (THR63) H3
	   (VAL69)   (THR75) H4
	   (LYS81)   (GLY92) E5
	   (GLU94)  (PRO104) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
E2     -147.0°   E2                                 
H3       78.2°  130.7°   H3                          
H4       24.1° -156.2°   72.6°   H4                   
E5      -91.9°  -56.2°  139.1° -111.7°   E5            
E6       62.9°  149.4°  -35.8°   45.8°  154.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1wdde2 :    (TYR20)  (PRO104)   [view usage] : d.58.9.1 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Rice (Oryza sativa) [TaxId: 4530]
 d1wdda2 :    (TYR20)  (PRO104)   [view usage] : d.58.9.1 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Rice (Oryza sativa) [TaxId: 4530]
 d1rsca2 :    (TYR20)  (PRO104)   [view usage] : d.58.9.1 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Synechococcus sp., strain pcc 6301 [TaxId: 1131]
 d1rbla2 :    (TYR20)  (PRO104)   [view usage] : d.58.9.1 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Synechococcus sp., strain pcc 6301 [TaxId: 1131]
 d4mkva1 :    (TYR20)  (PRO104)   [view usage] : d.58.9.0 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |automated matches |automated matches |Pea (Pisum sativum) [TaxId: 3888]
 d1ir1a2 :    (TYR20)  (PRO104)   [view usage] : d.58.9.1 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Spinach (Spinacia oleracea) [TaxId: 3562]
 d1ausl2 :    (TYR20)  (PRO104)   [view usage] : d.58.9.1 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Spinach (Spinacia oleracea) [TaxId: 3562]
 d1upmb1 :    (TYR20)  (PRO104)   [view usage] : d.58.9.1 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Spinach (Spinacia oleracea) [TaxId: 3562]
 d1rbob2 :    (TYR20)  (PRO104)   [view usage] : d.58.9.1 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Spinach (Spinacia oleracea) [TaxId: 3562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.58