Tableau information
Concept source: d1a53a_ amino acid (a.a.) range (LYS191)(LEU248)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: HEHEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS191) (ILE201) H1
(VAL206) (SER211) E2
(ARG216) (GLY226) H3
(ASN228) (SER234) E4
(SER234) (ASN239) H5
(LYS242) (LEU248) H6
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 177.6° E2
H3 -29.4° 148.9° H3
E4 154.4° -24.9° 152.3° E4
H5 -116.0° 65.9° -145.1° -57.2° H5
H6 -44.3° 136.3° -35.9° 161.1° 126.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2dqxa_ : (PRO359) (ALA443) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Soybean (Glycine max) [TaxId: 3847]
d2w79a_ : (LEU63) (ASP119) [view usage] : c.1.2.1 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Histidine biosynthesis enzymes |automated matches |Thermotoga maritima [TaxId: 2336]
d2w79a_ : (SER178) (ARG241) [view usage] : c.1.2.1 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Histidine biosynthesis enzymes |automated matches |Thermotoga maritima [TaxId: 2336]
d3o6ca_ : (LEU110) (LEU194) [view usage] : c.1.24.0 |TIM beta/alpha-barrel |Pyridoxine 5'-phosphate synthase |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d3o6ca_ : (CYS195) (ILE255) [view usage] : c.1.24.0 |TIM beta/alpha-barrel |Pyridoxine 5'-phosphate synthase |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d1ep1a_ : (LYS226) (LYS286) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Dihydroorotate dehydrogenase |Lactococcus lactis, isozyme B [TaxId: 1358]
d1yr7a_ : (HIS112) (ASP184) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |ATP(GTP)-binding protein PAB0955 |Pyrococcus abyssi [TaxId: 29292]
d1vena2 : (LYS347) (LEU415) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Bacillus cereus [TaxId: 1396]
d3thaa_ : (LYS177) (PHE247) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d1yr8a_ : (HIS112) (PHE182) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |ATP(GTP)-binding protein PAB0955 |Pyrococcus abyssi [TaxId: 29292]
d2ap9b_ : (THR11) (ALA121) [view usage] : c.73.1.2 |Carbamate kinase-like |Carbamate kinase-like |N-acetyl-l-glutamate kinase |N-acetyl-l-glutamate kinase |Mycobacterium tuberculosis [TaxId: 1773]
d1ps9a1 : (SER269) (GLY326) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |2,4-dienoyl-CoA reductase, N-terminal domain |Escherichia coli [TaxId: 562]
d1qo2a_ : (LEU63) (GLU117) [view usage] : c.1.2.1 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Histidine biosynthesis enzymes |Phosphoribosylformimino-5-aminoimidazole carboxamide ribotite isomerase HisA |Thermotoga maritima [TaxId: 2336]
d1qo2a_ : (SER178) (ARG238) [view usage] : c.1.2.1 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Histidine biosynthesis enzymes |Phosphoribosylformimino-5-aminoimidazole carboxamide ribotite isomerase HisA |Thermotoga maritima [TaxId: 2336]
d1fa2a_ : (PRO361) (ALA445) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |beta-Amylase |Sweet potato (Ipomoea batatas) [TaxId: 4120]
d1z63a1 : (ARG445) (PRO516) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Helicase of the SNF2/Rad54 hamily |Sulfolobus solfataricus [TaxId: 2287]
d1yrab_ : (HIS112) (ILE185) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |ATP(GTP)-binding protein PAB0955 |Pyrococcus abyssi [TaxId: 29292]
d1jqdb_ : (THR119) (GLY212) [view usage] : c.66.1.19 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Histamine methyltransferase |Histamine methyltransferase |Human (Homo sapiens) [TaxId: 9606]
d1ghsa_ : (VAL77) (THR159) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Plant beta-glucanases |Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]
d1ezwa_ : (GLU292) (GLY340) [view usage] : c.1.16.3 |TIM beta/alpha-barrel |Bacterial luciferase-like |F420 dependent oxidoreductases |Coenzyme F420 dependent tetrahydromethanopterin reductase |Methanopyrus kandleri [TaxId: 2320]
d1b4ea_ : (ASN225) (ALA304) [view usage] : c.1.10.3 |TIM beta/alpha-barrel |Aldolase |5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) |5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) |Escherichia coli [TaxId: 562]
d9rubb1 : (GLY252) (GLY316) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Rhodospirillum rubrum [TaxId: 1085]
d1jcmp_ : (ASN196) (GLY255) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |Indole-3-glycerophosphate synthase, IPGS |Escherichia coli [TaxId: 562]
d2y88a_ : (ASN182) (ASP245) [view usage] : c.1.2.1 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Histidine biosynthesis enzymes |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d2woqa_ : (GLU241) (GLY317) [view usage] : c.1.10.3 |TIM beta/alpha-barrel |Aldolase |5-aminolaevulinate dehydratase, ALAD (porphobilinogen synthase) |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d3tq0a_ : (LEU227) (LYS297) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |automated matches |Leishmania major [TaxId: 347515]
d2vdca2 : (PRO619) (LYS710) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Alpha subunit of glutamate synthase, central and FMN domains |Azospirillum brasilense [TaxId: 192]
d1dbta_ : (ALA166) (GLU235) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) |Bacillus subtilis [TaxId: 1423]
d3o8aa_ : (LYS482) (GLY554) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |automated matches |Plasmodium falciparum [TaxId: 36329]
d1gtza_ : (HIS58) (ALA126) [view usage] : c.23.13.1 |Flavodoxin-like |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Type II 3-dehydroquinate dehydratase |Streptomyces coelicolor [TaxId: 1902]
d1h7xa2 : (ARG771) (ILE843) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Dihydropyrimidine dehydrogenase, domain 4 |Pig (Sus scrofa) [TaxId: 9823]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.66, c.23, c.37, c.73