Protein Concepts Dictionary

Tableau information

Concept source:  d1k1eg_  amino acid (a.a.) range (LYS84)(GLY160)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LYS84)   (GLY96) H1
	  (THR102)  (GLY106) E2
	  (ASP111)  (ALA117) H3
	  (GLY119)  (ALA123) E4
	  (ILE129)  (VAL135) H5
	  (GLY146)  (GLY160) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
E2      144.7°   E2                                 
H3      -41.3° -159.8°   H3                          
E4      123.9°  -22.7° -144.2°   E4                   
H5      -37.3° -165.9°    6.4° -148.0°   H5            
H6      -43.6°  155.0°   -4.8°  140.1°  -11.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1k1ea_ :    (LYS84)  (GLY160)   [view usage] : c.108.1.5 |HAD-like |HAD-like |Probable phosphatase YrbI |Probable phosphatase YrbI |Haemophilus influenzae, HI1679 [TaxId: 727]
 d3fzqa_ :   (LYS200)  (ASN271)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
 d3wc4a_ :   (GLN328)  (VAL404)   [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Clitoria ternatea [TaxId: 43366]
 d1e3ta_ :   (ILE115)  (ALA201)   [view usage] : c.31.1.4 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Transhydrogenase domain III (dIII) |Transhydrogenase domain III (dIII) |Rhodospirillum rubrum [TaxId: 1085]
 d1k1ek_ :    (LYS84)  (GLY160)   [view usage] : c.108.1.5 |HAD-like |HAD-like |Probable phosphatase YrbI |Probable phosphatase YrbI |Haemophilus influenzae, HI1679 [TaxId: 727]
 d1k1eg_ :    (LYS84)  (GLY160)   [view usage] : c.108.1.5 |HAD-like |HAD-like |Probable phosphatase YrbI |Probable phosphatase YrbI |Haemophilus influenzae, HI1679 [TaxId: 727]
 d3r77a_ :   (LEU133)  (VAL206)   [view usage] : c.33.1.3 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Phenazine biosynthesis protein PhzD |Pseudomonas fluorescens [TaxId: 294]
 d1nf2a_ :   (GLY192)  (ILE261)   [view usage] : c.108.1.10 |HAD-like |HAD-like |Predicted hydrolases Cof |Hypothetical protein TM0651 |Thermotoga maritima [TaxId: 2336]
 d4qjbb_ :   (PHE216)  (THR284)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.108,    c.87,    c.31,    c.33