Protein Concepts Dictionary

Tableau information

Concept source:  d1kf0a_  amino acid (a.a.) range (GLN349)(LEU413)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLN349)  (GLY365) H1
	  (ILE367)  (GLY371) E2
	  (GLY373)  (ASN383) H3
	  (SER389)  (GLY394) E4
	  (GLY394)  (GLY404) H5
	  (LEU407)  (LEU413) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
E2     -142.1°   E2                                 
H3      -80.0° -114.2°   H3                          
E4      123.3°  -21.0° -128.6°   E4                   
H5       68.3° -116.1°  128.1°  103.2°   H5            
H6      -31.0°  111.2°   97.4°   92.6°  -75.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4dg5a_ :   (PHE326)  (ILE393)   [view usage] : c.86.1.0 |Phosphoglycerate kinase |Phosphoglycerate kinase |automated matches |automated matches |Staphylococcus aureus [TaxId: 282458]
 d1vpea_ :   (GLU330)  (SER393)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Thermotoga maritima [TaxId: 2336]
 d1phpa_ :   (HIS329)  (LEU391)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Bacillus stearothermophilus [TaxId: 1422]
 d4o33a_ :   (ALA348)  (LEU413)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3oz7a_ :   (LYS349)  (LEU413)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d2xe6a_ :   (ARG349)  (LEU413)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2p9ta_ :   (LYS349)  (LEU413)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1kf0a_ :   (GLN349)  (LEU413)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Pig (Sus scrofa) [TaxId: 9823]
 d1hdia_ :   (GLN349)  (LEU413)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Pig (Sus scrofa) [TaxId: 9823]
 d1vjca_ :   (GLN349)  (LEU413)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Pig (Sus scrofa) [TaxId: 9823]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.86