Protein Concepts Dictionary

Tableau information

Concept source:  d1ta8a_  amino acid (a.a.) range (THR239)(PHE316)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (THR239)  (GLY251) H1
	  (GLU257)  (GLN262) E2
	  (ILE264)  (LYS277) H3
	  (GLY287)  (VAL292) E4
	  (PHE295)  (LEU301) H5
	  (TRP310)  (PHE316) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
E2     -148.4°   E2                                 
H3       47.9°  162.2°   H3                          
E4      112.7°  -36.5°  160.6°   E4                   
H5     -120.5°   78.4°  -97.4°   94.7°   H5            
E6      -78.2°  129.3°  -33.0°  161.2°   92.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3pn1a_ :   (THR239)  (PHE316)   [view usage] : d.142.2.0 |ATP-grasp |DNA ligase/mRNA capping enzyme, catalytic domain |automated matches |automated matches |Haemophilus influenzae [TaxId: 727]
 d1v9pa3 :   (SER239)  (PHE316)   [view usage] : d.142.2.2 |ATP-grasp |DNA ligase/mRNA capping enzyme, catalytic domain |Adenylation domain of NAD+-dependent DNA ligase |Adenylation domain of NAD+-dependent DNA ligase |Thermus filiformis [TaxId: 276]
 d1zaua_ :   (THR248)  (TYR325)   [view usage] : d.142.2.0 |ATP-grasp |DNA ligase/mRNA capping enzyme, catalytic domain |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d1dgsa3 :   (SER236)  (PHE313)   [view usage] : d.142.2.2 |ATP-grasp |DNA ligase/mRNA capping enzyme, catalytic domain |Adenylation domain of NAD+-dependent DNA ligase |Adenylation domain of NAD+-dependent DNA ligase |Thermus filiformis [TaxId: 276]
 d1ta8a_ :   (THR239)  (PHE316)   [view usage] : d.142.2.2 |ATP-grasp |DNA ligase/mRNA capping enzyme, catalytic domain |Adenylation domain of NAD+-dependent DNA ligase |Adenylation domain of NAD+-dependent DNA ligase |Enterococcus faecalis [TaxId: 1351]
 d3baaa_ :   (THR239)  (PHE316)   [view usage] : d.142.2.2 |ATP-grasp |DNA ligase/mRNA capping enzyme, catalytic domain |Adenylation domain of NAD+-dependent DNA ligase |Adenylation domain of NAD+-dependent DNA ligase |Enterococcus faecalis [TaxId: 1351]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.142