Tableau information
Concept source: d1owma2 amino acid (a.a.) range (ALA48)(TRP128)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: HEHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA48) (GLY70) H1
(ARG72) (GLY78) E2
(PRO80) (GLN92) H3
(ALA95) (ASN99) E4
(GLU103) (GLY121) H5
(ILE122) (TRP128) E6
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -144.0° E2
H3 -7.3° 138.5° H3
E4 136.3° -79.1° 142.4° E4
H5 -37.4° 106.6° -32.5° -169.8° H5
E6 117.1° -97.4° 123.6° -19.5° -151.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ig3a2 : (ARG96) (LYS178) [view usage] : c.100.1.1 |Thiamin pyrophosphokinase, catalytic domain |Thiamin pyrophosphokinase, catalytic domain |Thiamin pyrophosphokinase, catalytic domain |Thiamin pyrophosphokinase, catalytic domain |Mouse (Mus musculus) [TaxId: 10090]
d3ct6b_ : (ARG23) (ASN89) [view usage] : c.54.1.2 |PTS system fructose IIA component-like |PTS system fructose IIA component-like |DhaM-like |PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM |Lactococcus lactis [TaxId: 1358]
d4hv4b1 : (SER55) (ARG107) [view usage] : c.5.1.0 |MurCD N-terminal domain |MurCD N-terminal domain |automated matches |automated matches |Yersinia pestis [TaxId: 214092]
d4naha_ : (VAL60) (MET120) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Staphylococcus aureus [TaxId: 196620]
d1owla2 : (ALA48) (TRP128) [view usage] : c.28.1.1 |Cryptochrome/photolyase, N-terminal domain |Cryptochrome/photolyase, N-terminal domain |Cryptochrome/photolyase, N-terminal domain |DNA photolyase |Synechococcus elongatus [TaxId: 32046]
d3zpca2 : (GLN256) (VAL312) [view usage] : c.71.1.0 |Dihydrofolate reductase-like |Dihydrofolate reductase-like |automated matches |automated matches |Acinetobacter baumannii [TaxId: 470]
d1atzb_ : (LYS988) (GLY1065) [view usage] : c.62.1.1 |vWA-like |vWA-like |Integrin A (or I) domain |von Willebrand factor A3 domain, vWA3 |Human (Homo sapiens) [TaxId: 9606]
d3nx3a_ : (GLN151) (GLU220) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d1q77a_ : (GLU58) (LYS135) [view usage] : c.26.2.4 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |Universal stress protein-like |Hypothetical protein Aq_178 |Aquifex aeolicus [TaxId: 63363]
d1ubga1 : (GLU104) (ILE194) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |RecA protein, ATPase-domain |Mycobacterium smegmatis [TaxId: 1772]
d3orya1 : (GLU133) (ASN191) [view usage] : c.120.1.0 |PIN domain-like |PIN domain-like |automated matches |automated matches |Desulfurococcus amylolyticus [TaxId: 94694]
d3h8ja1 : (ASP100) (SER171) [view usage] : c.120.1.2 |PIN domain-like |PIN domain-like |5' to 3' exonuclease catalytic domain |T4 RNase H |Bacteriophage T4 [TaxId: 10665]
d3hgma_ : (ASP62) (VAL147) [view usage] : c.26.2.0 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |automated matches |automated matches |Halomonas elongata [TaxId: 2746]
d3s4ya1 : (ARG76) (GLU158) [view usage] : c.100.1.1 |Thiamin pyrophosphokinase, catalytic domain |Thiamin pyrophosphokinase, catalytic domain |Thiamin pyrophosphokinase, catalytic domain |Thiamin pyrophosphokinase, catalytic domain |Human (Homo sapiens) [TaxId: 9606]
d1s4ma2 : (THR55) (ASP127) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |FMN adenylyltransferase domain of bifunctional FAD synthetase |Thermotoga maritima [TaxId: 2336]
d2nx2a1 : (GLU89) (THR167) [view usage] : c.129.1.2 |MCP/YpsA-like |MCP/YpsA-like |YpsA-like |Hypothetical protein YpsA |Bacillus subtilis [TaxId: 1423]
d2f17a2 : (ARG76) (LYS158) [view usage] : c.100.1.1 |Thiamin pyrophosphokinase, catalytic domain |Thiamin pyrophosphokinase, catalytic domain |Thiamin pyrophosphokinase, catalytic domain |Thiamin pyrophosphokinase, catalytic domain |Mouse (Mus musculus) [TaxId: 10090]
d1lbqa_ : (PRO103) (ARG198) [view usage] : c.92.1.1 |Chelatase-like |Chelatase |Ferrochelatase |Ferrochelatase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1owma2 : (ALA48) (TRP128) [view usage] : c.28.1.1 |Cryptochrome/photolyase, N-terminal domain |Cryptochrome/photolyase, N-terminal domain |Cryptochrome/photolyase, N-terminal domain |DNA photolyase |Synechococcus elongatus [TaxId: 32046]
d1np7a2 : (GLY56) (TRP136) [view usage] : c.28.1.1 |Cryptochrome/photolyase, N-terminal domain |Cryptochrome/photolyase, N-terminal domain |Cryptochrome/photolyase, N-terminal domain |Cryptochrome |Synechocystis sp. PCC 6803 [TaxId: 1148]
d1ig3b2 : (ARG96) (LYS178) [view usage] : c.100.1.1 |Thiamin pyrophosphokinase, catalytic domain |Thiamin pyrophosphokinase, catalytic domain |Thiamin pyrophosphokinase, catalytic domain |Thiamin pyrophosphokinase, catalytic domain |Mouse (Mus musculus) [TaxId: 10090]
d3k2wd_ : (GLY193) (MET265) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudoalteromonas atlantica [TaxId: 342610]
d3h7ia1 : (ASP100) (SER171) [view usage] : c.120.1.2 |PIN domain-like |PIN domain-like |5' to 3' exonuclease catalytic domain |T4 RNase H |Bacteriophage T4 [TaxId: 10665]
d1wyta1 : (SER103) (GLY185) [view usage] : c.67.1.7 |PLP-dependent transferase-like |PLP-dependent transferases |Glycine dehydrogenase subunits (GDC-P) |Glycine dehydrogenase (decarboxylating) subunit 1 |Thermus thermophilus [TaxId: 274]
d1b43a2 : (ASN127) (ASN186) [view usage] : c.120.1.2 |PIN domain-like |PIN domain-like |5' to 3' exonuclease catalytic domain |Flap endonuclease-1 (Fen-1 nuclease) |Pyrococcus furiosus [TaxId: 2261]
d3nbaa_ : (ASP46) (ALA117) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d1qnfa2 : (ALA48) (TRP128) [view usage] : c.28.1.1 |Cryptochrome/photolyase, N-terminal domain |Cryptochrome/photolyase, N-terminal domain |Cryptochrome/photolyase, N-terminal domain |DNA photolyase |Synechococcus elongatus [TaxId: 32046]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.67, c.82, c.26, c.92, c.37, c.62, c.71, c.28, c.120, c.129, c.54, c.5, c.100