Protein Concepts Dictionary

Tableau information

Concept source:  d3gcza_  amino acid (a.a.) range (SER153)(LEU246)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER153)  (GLY175) H1
	  (GLU179)  (LEU185) E2
	  (PRO190)  (LYS202) H3
	  (GLY206)  (LEU212) E4
	  (HIS218)  (SER224) E5
	  (VAL231)  (LEU246) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
E2      165.3°   E2                                 
H3       11.6°  175.1°   H3                          
E4      122.5°  -66.2°  118.6°   E4                   
E5       -9.7°  162.4°   12.8°  130.5°   E5            
H6      144.5°  -46.3°  138.6°   22.7°  151.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2px5a_ :   (VAL168)  (MET244)   [view usage] : c.66.1.25 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |mRNA cap methylase |An RNA cap (nucleoside-2'-O-)-methyltransferase domain of RNA polymerase NS5 |Murray valley encephalitis virus (strain mve-1-51) [TaxId: 301478]
 d2pxaa_ :   (VAL168)  (MET244)   [view usage] : c.66.1.25 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |mRNA cap methylase |An RNA cap (nucleoside-2'-O-)-methyltransferase domain of RNA polymerase NS5 |Murray valley encephalitis virus (strain mve-1-51) [TaxId: 301478]
 d2xbmb_ :   (SER153)  (MET244)   [view usage] : c.66.1.25 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |mRNA cap methylase |automated matches |Dengue virus [TaxId: 12637]
 d3evga_ :   (PRO154)  (PHE243)   [view usage] : c.66.1.25 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |mRNA cap methylase |automated matches |Dengue virus 2 16681-pdk53 [TaxId: 31635]
 d3emda_ :   (PRO154)  (THR245)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Wesselsbron virus [TaxId: 164416]
 d2xbma_ :   (SER153)  (THR243)   [view usage] : c.66.1.25 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |mRNA cap methylase |automated matches |Dengue virus [TaxId: 12637]
 d2xbmc_ :   (SER153)  (MET244)   [view usage] : c.66.1.25 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |mRNA cap methylase |automated matches |Dengue virus [TaxId: 12637]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.66