Protein Concepts Dictionary

Tableau information

Concept source:  d2bjjx2  amino acid (a.a.) range (GLY528)(HIS591)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY528)  (ASN539) H1
	  (ASP542)  (VAL546) E2
	  (VAL549)  (ASN554) H3
	  (ASP571)  (LEU577) E4
	  (GLY579)  (PRO583) E5
	  (ALA587)  (HIS591) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
E2     -159.6°   E2                                 
H3      -65.4°  108.3°   H3                          
E4      111.8°  -76.8°  172.0°   E4                   
E5      -98.6°   68.7°  -42.0°  144.7°   E5            
H6       97.8°  -99.9°  132.6°   39.4° -154.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1dota1 :   (GLY190)  (ASN243)   [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Ovotransferrin |Duck (Anas platyrhynchos) [TaxId: 8839]
 d1h76a1 :   (GLY191)  (TYR246)   [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Pig (Sus scrofa) [TaxId: 9823]
 d1nfta_ :   (GLY190)  (ASN243)   [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Ovotransferrin |Chicken (Gallus gallus) [TaxId: 9031]
 d2bjjx2 :   (GLY528)  (HIS591)   [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1gv8a_ :   (GLY193)  (ASN246)   [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Ovotransferrin |Duck (Anas platyrhynchos) [TaxId: 8839]
 d1nnta_ :   (GLY190)  (ASN243)   [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Ovotransferrin |Chicken (Gallus gallus) [TaxId: 9031]
 d1gvca_ :   (GLY193)  (ASN246)   [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Ovotransferrin |Duck (Anas platyrhynchos) [TaxId: 8839]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.94