Protein Concepts Dictionary

Tableau information

Concept source:  d4ijna2  amino acid (a.a.) range (PRO318)(ALA372)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO318)  (LEU324) H1
	  (GLY331)  (ASP335) E2
	  (ASP335)  (ALA341) H3
	  (PRO346)  (THR351) E4
	  (ARG355)  (GLU366) E5
	  (GLU366)  (ALA372) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
E2     -153.4°   E2                                 
H3      149.6°  -55.2°   H3                          
E4      -44.8°  108.9° -153.4°   E4                   
E5      141.3°  -63.8°   -8.7°  157.1°   E5            
H6      -83.7°  119.5°   79.2° -125.9°   72.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4h0pb2 :   (GLY366)  (GLY429)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Cryptococcus neoformans [TaxId: 5207]
 d4h0oa2 :   (TRP329)  (LEU389)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Entamoeba (Entamoeba histolytica) [TaxId: 5759]
 d1x3ma1 :   (SER331)  (GLY393)   [view usage] : c.55.1.2 |Ribonuclease H-like motif |Actin-like ATPase domain |Acetokinase-like |Propionate kinase |Salmonella typhimurium [TaxId: 90371]
 d1tuua2 :   (SER338)  (GLU399)   [view usage] : c.55.1.2 |Ribonuclease H-like motif |Actin-like ATPase domain |Acetokinase-like |Acetate kinase |Methanosarcina thermophila [TaxId: 2210]
 d4h0pa2 :   (GLY366)  (GLY429)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Cryptococcus neoformans [TaxId: 5207]
 d1g99a2 :   (SER336)  (THR398)   [view usage] : c.55.1.2 |Ribonuclease H-like motif |Actin-like ATPase domain |Acetokinase-like |Acetate kinase |Methanosarcina thermophila [TaxId: 2210]
 d4ijna2 :   (PRO318)  (ALA372)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d3r9pa2 :   (ALA325)  (GLY386)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Mycobacterium avium [TaxId: 1770]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.55