Protein Concepts Dictionary

Tableau information

Concept source:  d3fm4a_  amino acid (a.a.) range (PHE197)(LEU268)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PHE197)  (LEU203) H1
	  (GLY216)  (GLN219) E2
	  (GLY224)  (LEU228) E3
	  (LEU228)  (ARG236) H4
	  (ASP237)  (SER246) H5
	  (GLN251)  (LEU268) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
E2       79.4°   E2                                 
E3      -82.1°  147.5°   E3                          
H4      -87.7°   84.9°   67.8°   H4                   
H5     -134.1°  -54.7°  135.7°  -86.5°   H5            
H6       99.1° -152.9°   56.7°  122.1° -122.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4fcsa_ :   (GLN196)  (LEU268)   [view usage] : a.93.1.0 |Heme-dependent peroxidases |Heme-dependent peroxidases |automated matches |automated matches |Pleurotus eryngii [TaxId: 5323]
 d4bm1a_ :   (GLN203)  (LEU275)   [view usage] : a.93.1.0 |Heme-dependent peroxidases |Heme-dependent peroxidases |automated matches |automated matches |Oyster mushroom (Pleurotus ostreatus) [TaxId: 5322]
 d1ly8b_ :   (PHE211)  (LEU282)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Fungal peroxidase (ligninase) |Inky cap (Coprinus cinereus) [TaxId: 5346]
 d4fcna_ :   (GLN196)  (LEU268)   [view usage] : a.93.1.0 |Heme-dependent peroxidases |Heme-dependent peroxidases |automated matches |automated matches |Pleurotus eryngii [TaxId: 5323]
 d2vkaa_ :   (GLN196)  (LEU268)   [view usage] : a.93.1.0 |Heme-dependent peroxidases |Heme-dependent peroxidases |automated matches |automated matches |Pleurotus eryngii [TaxId: 5323]
 d1lyka_ :   (PHE211)  (LEU282)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Fungal peroxidase (ligninase) |Inky cap (Coprinus cinereus) [TaxId: 5346]
 d4bm4a_ :   (PHE204)  (LEU275)   [view usage] : a.93.1.0 |Heme-dependent peroxidases |Heme-dependent peroxidases |automated matches |automated matches |Oyster mushroom (Pleurotus ostreatus) [TaxId: 5322]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.93