Tableau information
Concept source: d1egab2 amino acid (a.a.) range (GLN190)(LYS280)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: HEEHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN190) (GLY207) H1
(TYR212) (ILE218) E2
(GLY228) (GLU238) E3
(GLY241) (ILE247) H4
(ALA252) (GLU270) H5
(HIS274) (LYS280) E6
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 144.8° E2
E3 -49.5° 159.4° E3
H4 93.2° -60.9° 139.4° H4
H5 142.6° -47.2° 136.7° 61.9° H5
E6 -60.0° 144.3° -15.3° -152.9° 137.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1l2fa3 : (GLN281) (PRO340) [view usage] : d.52.3.1 |Alpha-lytic protease prodomain-like |Prokaryotic type KH domain (KH-domain type II) |Prokaryotic type KH domain (KH-domain type II) |Transcription factor NusA, C-terminal domains |Thermotoga maritima [TaxId: 2336]
d1hh2p3 : (ASP278) (PRO340) [view usage] : d.52.3.1 |Alpha-lytic protease prodomain-like |Prokaryotic type KH domain (KH-domain type II) |Prokaryotic type KH domain (KH-domain type II) |Transcription factor NusA, C-terminal domains |Thermotoga maritima [TaxId: 2336]
d4dqqa2 : (ASN782) (TYR868) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |automated matches |Geobacillus kaustophilus [TaxId: 235909]
d3tdea1 : (HIS17) (GLY100) [view usage] : d.130.1.0 |S-adenosylmethionine synthetase |S-adenosylmethionine synthetase |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d4ez9a2 : (ASN782) (TYR868) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |automated matches |Geobacillus kaustophilus [TaxId: 1462]
d1egaa2 : (GLN190) (VAL279) [view usage] : d.52.3.1 |Alpha-lytic protease prodomain-like |Prokaryotic type KH domain (KH-domain type II) |Prokaryotic type KH domain (KH-domain type II) |GTPase Era C-terminal domain |Escherichia coli [TaxId: 562]
d3s82a1 : (HIS17) (PRO106) [view usage] : d.130.1.0 |S-adenosylmethionine synthetase |S-adenosylmethionine synthetase |automated matches |automated matches |Mycobacterium avium [TaxId: 243243]
d3s82b1 : (HIS17) (PRO106) [view usage] : d.130.1.0 |S-adenosylmethionine synthetase |S-adenosylmethionine synthetase |automated matches |automated matches |Mycobacterium avium [TaxId: 243243]
d1egab2 : (GLN190) (LYS280) [view usage] : d.52.3.1 |Alpha-lytic protease prodomain-like |Prokaryotic type KH domain (KH-domain type II) |Prokaryotic type KH domain (KH-domain type II) |GTPase Era C-terminal domain |Escherichia coli [TaxId: 562]
d1k0ra3 : (PRO264) (GLY325) [view usage] : d.52.3.1 |Alpha-lytic protease prodomain-like |Prokaryotic type KH domain (KH-domain type II) |Prokaryotic type KH domain (KH-domain type II) |Transcription factor NusA, C-terminal domains |Mycobacterium tuberculosis [TaxId: 1773]
d1wh9a_ : (SER6) (THR84) [view usage] : d.52.3.1 |Alpha-lytic protease prodomain-like |Prokaryotic type KH domain (KH-domain type II) |Prokaryotic type KH domain (KH-domain type II) |Ribosomal protein S3 N-terminal domain |Mouse (Mus musculus) [TaxId: 10090]
d1s1hc_ : (LYS9) (ARG89) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3rv2a1 : (HIS17) (PRO106) [view usage] : d.130.1.0 |S-adenosylmethionine synthetase |S-adenosylmethionine synthetase |automated matches |automated matches |Mycobacterium marinum [TaxId: 216594]
d3tdec1 : (HIS17) (SER105) [view usage] : d.130.1.0 |S-adenosylmethionine synthetase |S-adenosylmethionine synthetase |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d3u5ch_ : (THR117) (ILE185) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Saccharomyces cerevisiae [TaxId: 559292]
d3tdeb1 : (HIS17) (GLN104) [view usage] : d.130.1.0 |S-adenosylmethionine synthetase |S-adenosylmethionine synthetase |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d2xzmc_ : (ASN9) (PRO93) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, i.1, d.130, d.52