Protein Concepts Dictionary

Tableau information

Concept source:  d1mdba_  amino acid (a.a.) range (GLU443)(ALA535)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU443)  (PRO453) H1
	  (HIS456)  (SER462) E2
	  (ARG471)  (ILE477) E3
	  (LYS484)  (GLY496) H4
	  (ASP504)  (GLU510) E5
	  (LYS522)  (ALA535) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
E2      152.0°   E2                                 
E3      -38.6°  160.2°   E3                          
H4      107.7°  -84.1°  109.6°   H4                   
E5      -57.7°  136.4°  -23.8°  123.4°   E5            
H6       84.9°  -67.6°  113.1° -122.6°  110.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2vzea_ :   (PRO475)  (TRP568)   [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1mdba_ :   (GLU443)  (ALA535)   [view usage] : e.23.1.1 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |Dihydroxybenzoate-AMP ligase DhbE |Bacillus subtilis [TaxId: 1423]
 d4eata_ :   (PHE436)  (GLY521)   [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]
 d3cw9a_ :   (PRO414)  (SER503)   [view usage] : e.23.1.1 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |4-chlorobenzoyl CoA ligase |Alcaligenes sp. AL3007 [TaxId: 206162]
 d2vzec_ :   (GLY474)  (LYS569)   [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3a9va_ :   (ALA447)  (GLU531)   [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Populus tomentosa [TaxId: 118781]
 d1md9a_ :   (GLU443)  (ALA535)   [view usage] : e.23.1.1 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |Dihydroxybenzoate-AMP ligase DhbE |Bacillus subtilis [TaxId: 1423]
 d3dlpx_ :   (PRO414)  (SER504)   [view usage] : e.23.1.1 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |4-chlorobenzoyl CoA ligase |Alcaligenes sp. AL3007 [TaxId: 206162]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  e.23