Tableau information
Concept source: d1pugd_ amino acid (a.a.) range (MET21)(VAL95)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: HEEEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(MET21) (LEU31) H1
(LEU31) (SER37) E2
(LEU41) (ASN47) E3
(ARG53) (ASP58) E4
(ASP58) (ASP64) H5
(LYS66) (VAL95) H6
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -46.9° E2
E3 -149.0° 157.6° E3
E4 32.6° -24.6° 176.2° E4
H5 -74.1° 50.1° -111.1° 72.2° H5
H6 151.4° 142.9° -37.7° 138.6° -134.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3f42a_ : (PHE3) (GLY92) [view usage] : d.222.1.0 |YbaB-like |YbaB-like |automated matches |automated matches |Helicobacter pylori [TaxId: 210]
d1puga_ : (MET11) (MET99) [view usage] : d.222.1.1 |YbaB-like |YbaB-like |YbaB-like |Hypothetical upf0133 protein YbaB |Escherichia coli [TaxId: 562]
d1pugb_ : (MET21) (LYS91) [view usage] : d.222.1.1 |YbaB-like |YbaB-like |YbaB-like |Hypothetical upf0133 protein YbaB |Escherichia coli [TaxId: 562]
d1j8ba_ : (LEU10) (GLN88) [view usage] : d.222.1.1 |YbaB-like |YbaB-like |YbaB-like |Hypothetical protein HI0442 |Haemophilus influenzae [TaxId: 727]
d1pugd_ : (MET21) (VAL95) [view usage] : d.222.1.1 |YbaB-like |YbaB-like |YbaB-like |Hypothetical upf0133 protein YbaB |Escherichia coli [TaxId: 562]
d1ybxa_ : (ILE13) (THR103) [view usage] : d.222.1.0 |YbaB-like |YbaB-like |automated matches |automated matches |Clostridium thermocellum [TaxId: 1515]
d1pugc_ : (GLN18) (VAL95) [view usage] : d.222.1.1 |YbaB-like |YbaB-like |YbaB-like |Hypothetical upf0133 protein YbaB |Escherichia coli [TaxId: 562]
d1ybxb_ : (ASN12) (THR103) [view usage] : d.222.1.0 |YbaB-like |YbaB-like |automated matches |automated matches |Clostridium thermocellum [TaxId: 1515]
d3f42b_ : (GLY8) (MSE90) [view usage] : d.222.1.0 |YbaB-like |YbaB-like |automated matches |automated matches |Helicobacter pylori [TaxId: 210]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.222