Protein Concepts Dictionary

Tableau information

Concept source:  d3atya_  amino acid (a.a.) range (LYS46)(LEU104)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LYS46)   (ALA52) H1
	   (GLY55)   (ALA59) E2
	   (GLU60)   (GLN65) E3
	   (GLU74)   (TYR78) E4
	   (SER79)   (LYS95) H5
	   (GLY98)  (LEU104) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
E2      163.2°   E2                                 
E3     -130.9°   38.0°   E3                          
E4      -92.4°  -83.7°  -48.9°   E4                   
H5      -31.3°  163.2° -157.9° -109.8°   H5            
E6      129.3°  -34.1°  -38.0°  -83.7°  152.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4awua_ :    (HIS39)  (LEU101)   [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Shewanella oneidensis [TaxId: 211586]
 d4a3ua_ :    (ILE38)  (ARG104)   [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Zymomonas mobilis [TaxId: 542]
 d4k7ya_ :    (TRP52)  (LEU115)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
 d3atzb_ :    (LYS46)  (ALA107)   [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
 d4qnwa_ :    (LEU42)  (ARG112)   [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Aspergillus fumigatus [TaxId: 330879]
 d4h4ia_ :    (TRP52)  (LEU115)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
 d2gqaa_ :    (HIS39)  (LEU101)   [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Shewanella oneidensis [TaxId: 211586]
 d1k02a_ :    (ASN49)  (LEU115)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
 d4awsa_ :    (HIS39)  (LEU101)   [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Shewanella oneidensis [TaxId: 211586]
 d4gxma_ :    (TRP52)  (LEU115)   [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Old yellow enzyme (OYE) |Lager yeast (Saccharomyces pastorianus) [TaxId: 27292]
 d4e2dd_ :    (LYS46)  (LEU104)   [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1