Protein Concepts Dictionary

Tableau information

Concept source:  d2iuga_  amino acid (a.a.) range (SER18)(GLU90)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER18)   (ARG27) H1
	   (GLY32)   (ASP38) E2
	   (TYR47)   (ARG52) E3
	   (ASN56)   (ASP66) E4
	   (GLY67)   (PHE71) E5
	   (VAL80)   (GLU90) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
E2      160.9°   E2                                 
E3      -31.6°  157.9°   E3                          
E4      127.6°  -45.0°  157.0°   E4                   
E5      -59.9°  136.6°  -30.7°  152.0°   E5            
H6      -30.2°  168.9°  -22.0°  137.3°  -34.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2iuga_ :    (SER18)   (GLU90)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1a81a1 :    (THR21)   (GLU95)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Syk tyrosine kinase |Human (Homo sapiens) [TaxId: 9606]
 d2ekxa_ :    (SER19)   (ASN97)   [view usage] : d.93.1.0 |SH2-like |SH2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1a81e1 :    (THR21)   (SER93)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Syk tyrosine kinase |Human (Homo sapiens) [TaxId: 9606]
 d2b3oa1 :    (SER10)   (GLN82)   [view usage] : d.93.1.0 |SH2-like |SH2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4dgpa1 :    (THR12)   (HIS84)   [view usage] : d.93.1.0 |SH2-like |SH2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1fmka2 :   (THR154)  (HIS233)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |c-src tyrosine kinase |Human (Homo sapiens) [TaxId: 9606]
 d1mila_ :    (SER15)   (HIS84)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Shc adaptor protein |Human (Homo sapiens) [TaxId: 9606]
 d2pnaa_ :    (SER28)  (GLU100)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Phosphatidylinositol 3-kinase, p85-alpha subunit |Cow (Bos taurus) [TaxId: 9913]
 d2shpa2 :    (THR12)   (HIS84)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Tyrosine phoshatase shp-2 |Human (Homo sapiens) [TaxId: 9606]
 d1a81e2 :   (SER174)  (LYS247)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Syk tyrosine kinase |Human (Homo sapiens) [TaxId: 9606]
 d2iuib_ :  (SER1018) (GLU1090)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1blja_ :    (SER20)   (GLY99)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |P55 Blk protein tyrosine kinase |Mouse (Mus musculus) [TaxId: 10090]
 d2oq1a1 :    (SER18)   (ASP92)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |Tyrosine-protein kinase zap-70 |Human (Homo sapiens) [TaxId: 9606]
 d4f59a_ :   (THR157)  (HIS236)   [view usage] : d.93.1.1 |SH2-like |SH2 domain |SH2 domain |c-src tyrosine kinase |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.93