Tableau information
Concept source: d1yywc2 amino acid (a.a.) range (ASP151)(GLU219)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: HEEEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP151) (ARG163) H1
(PRO168) (LEU172) E2
(ILE173) (PRO178) E3
(LYS182) (LYS191) E4
(THR195) (GLY199) E5
(SER201) (GLU219) H6
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 135.4° E2
E3 168.9° -40.4° E3
E4 15.7° 151.0° 165.1° E4
E5 -160.9° -50.1° -29.7° 154.5° E5
H6 42.5° 138.6° 130.6° -36.4° 151.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1yywc2 : (ASP151) (GLU219) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |RNase III, C-terminal domain |Aquifex aeolicus [TaxId: 63363]
d2cpna1 : (ASN159) (VAL225) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |TAR RNA-binding protein 2 |Human (Homo sapiens) [TaxId: 9606]
d1yyka2 : (LYS153) (SER220) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |RNase III, C-terminal domain |Aquifex aeolicus [TaxId: 63363]
d2dmya1 : (MET19) (GLY82) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |Spermatid perinuclear RNA-binding protein |Human (Homo sapiens) [TaxId: 9606]
d1o0wb2 : (LYS170) (LEU235) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |RNase III, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d3zfzb3 : (SER564) (LEU656) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Staphylococcus aureus [TaxId: 158878]
d2nuga2 : (TYR152) (GLU218) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |RNase III, C-terminal domain |Aquifex aeolicus [TaxId: 63363]
d1h2ia_ : (GLY68) (ARG156) [view usage] : d.50.1.3 |dsRBD-like |dsRNA-binding domain-like |The homologous-pairing domain of Rad52 recombinase |The homologous-pairing domain of Rad52 recombinase |Human (Homo sapiens) [TaxId: 9606]
d1o0wa2 : (LYS170) (LEU236) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |RNase III, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d2dixa1 : (THR9) (ALA76) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |Interferon-inducible double stranded RNA-dependent protein kinase activator A |Human (Homo sapiens) [TaxId: 9606]
d1rc7a2 : (TYR152) (SER220) [view usage] : d.50.1.1 |dsRBD-like |dsRNA-binding domain-like |Double-stranded RNA-binding domain (dsRBD) |RNase III, C-terminal domain |Aquifex aeolicus [TaxId: 63363]
d4v1ah_ : (MET238) (LEU304) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, mitochondrial (54S or 39S subunit) |Pig (Sus scrofa) [TaxId: 9823]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3, i.1, d.50