Tableau information
Concept source: d4mbxf_ amino acid (a.a.) range (ASN216)(LYS293)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: HEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN216) (THR219) H1
(THR219) (GLY228) E2
(SER240) (LEU246) E3
(GLY252) (GLY257) E4
(ASP258) (TYR274) E5
(THR277) (LYS293) E6
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -81.3° E2
E3 129.8° 124.5° E3
E4 -141.1° -109.8° 75.6° E4
E5 -81.0° 8.5° 130.8° 104.7° E5
E6 76.7° 156.7° -67.0° -92.3° 157.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4mbzj_ : (ASN216) (LYS293) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d4fmhr_ : (ASN238) (LYS315) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Merkel cell polyomavirus [TaxId: 493803]
d4mbxf_ : (ASN216) (LYS293) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d4mbxa_ : (ASN216) (LYS293) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d4fmjr_ : (ASN238) (LYS319) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Merkel cell polyomavirus [TaxId: 493803]
d4fmhb_ : (ASN238) (LYS319) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Merkel cell polyomavirus [TaxId: 493803]
d4mbxd_ : (ASN216) (LYS293) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d4mbzd_ : (ASN216) (LYS293) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
d3bwqb_ : (ASN215) (LYS292) [view usage] : b.121.6.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |automated matches |automated matches |Simian virus 40 [TaxId: 10633]
d1vpna_ : (ASN234) (LYS316) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |Polyomavirus coat proteins |Murine polyomavirus, strain small-plaque 16 [TaxId: 10634]
d1sva6_ : (ASN215) (LYS296) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |Polyomavirus coat proteins |Simian virus 40, Sv40 [TaxId: 10633]
d1vpnb_ : (ASN234) (LYS316) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |Polyomavirus coat proteins |Murine polyomavirus, strain small-plaque 16 [TaxId: 10634]
d4fmib_ : (ASN238) (LYS319) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Merkel cell polyomavirus [TaxId: 493803]
d3bwqa_ : (ASN215) (LYS292) [view usage] : b.121.6.0 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |automated matches |automated matches |Simian virus 40 [TaxId: 10633]
d4mbxb_ : (ASN216) (LYS293) [view usage] : b.121.6.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Group I dsDNA viruses |Papovaviridae-like VP |automated matches |Human polyomavirus 9 [TaxId: 943908]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.121