Protein Concepts Dictionary

Tableau information

Concept source:  d1wlta1  amino acid (a.a.) range (GLU34)(ASP86)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: HEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU34)   (ARG40) H1
	   (GLN46)   (PHE51) E2
	   (GLY55)   (GLY59) E3
	   (LEU60)   (PRO66) E4
	   (PRO66)   (LYS77) E5
	   (ILE80)   (ASP86) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                        
E2      100.3°   E2                                 
E3      -62.4°  156.0°   E3                          
E4      -78.3°  165.6°   16.1°   E4                   
E5      125.7°  -42.8° -161.0°  148.0°   E5            
E6      -38.5°  135.9°  -23.9°  -40.0° -159.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4hn0d_ :    (GLY30)   (ASP85)   [view usage] : b.82.1.0 |Double-stranded beta-helix |RmlC-like cupins |automated matches |automated matches |Streptomyces bikiniensis [TaxId: 1896]
 d1wlta1 :    (GLU34)   (ASP86)   [view usage] : b.82.1.1 |Double-stranded beta-helix |RmlC-like cupins |dTDP-sugar isomerase |dTDP-4-dehydrorhamnose 3,5-epimerase RmlC |Sulfolobus tokodaii [TaxId: 111955]
 d4hn1a_ :    (GLY30)   (ASP85)   [view usage] : b.82.1.0 |Double-stranded beta-helix |RmlC-like cupins |automated matches |automated matches |Streptomyces bikiniensis [TaxId: 1896]
 d2ixca_ :    (THR31)   (ASP87)   [view usage] : b.82.1.1 |Double-stranded beta-helix |RmlC-like cupins |dTDP-sugar isomerase |dTDP-4-dehydrorhamnose 3,5-epimerase RmlC |Mycobacterium tuberculosis [TaxId: 1773]
 d1ofna_ :    (GLN31)   (ILE89)   [view usage] : b.82.1.1 |Double-stranded beta-helix |RmlC-like cupins |dTDP-sugar isomerase |dTDP-4-keto-6-deoxy-glucose-5-epimerase EvaD |Amycolatopsis orientalis [TaxId: 31958]
 d4hn1c_ :    (GLY30)   (ASP85)   [view usage] : b.82.1.0 |Double-stranded beta-helix |RmlC-like cupins |automated matches |automated matches |Streptomyces bikiniensis [TaxId: 1896]
 d4hmzb_ :    (GLY30)   (ASP85)   [view usage] : b.82.1.0 |Double-stranded beta-helix |RmlC-like cupins |automated matches |automated matches |Streptomyces bikiniensis [TaxId: 1896]
 d2ixia_ :    (ARG33)   (ASP86)   [view usage] : b.82.1.1 |Double-stranded beta-helix |RmlC-like cupins |dTDP-sugar isomerase |dTDP-4-dehydrorhamnose 3,5-epimerase RmlC |Pseudomonas aeruginosa [TaxId: 287]
 d2c0za1 :    (HIS31)   (LEU88)   [view usage] : b.82.1.1 |Double-stranded beta-helix |RmlC-like cupins |dTDP-sugar isomerase |Novobiocin biosynthesis protein NovW |Streptomyces caeruleus [TaxId: 195949]
 d1wa4a_ :    (GLU32)   (ASP88)   [view usage] : b.82.1.1 |Double-stranded beta-helix |RmlC-like cupins |dTDP-sugar isomerase |automated matches |Amycolatopsis orientalis [TaxId: 31958]
 d3ryka_ :    (ASN31)   (ASP87)   [view usage] : b.82.1.0 |Double-stranded beta-helix |RmlC-like cupins |automated matches |automated matches |Bacillus anthracis [TaxId: 198094]
 d1ep0a_ :    (ALA36)   (LEU89)   [view usage] : b.82.1.1 |Double-stranded beta-helix |RmlC-like cupins |dTDP-sugar isomerase |dTDP-4-dehydrorhamnose 3,5-epimerase RmlC |Methanobacterium thermoautotrophicum [TaxId: 145262]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.82