Protein Concepts Dictionary

Tableau information

Concept source:  d2zava_  amino acid (a.a.) range (GLY9)(GLY91)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EHHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLY9)   (PRO14) E1
	   (ARG21)   (GLY27) H2
	   (GLY27)   (GLY35) H3
	   (GLY35)   (GLN43) H4
	   (ASP46)   (GLY51) E5
	   (ASN69)   (GLY91) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
H2     -154.6°   H2                                 
H3     -129.5°  -40.2°   H3                          
H4      164.2°  -38.5°   50.1°   H4                   
E5      -29.3° -135.8° -140.6°  163.2°   E5            
H6      165.8°   16.2°   37.2°  -23.0°  151.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1p8pa_ :     (LYS6)   (GLY91)   [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2zava_ :     (GLY9)   (GLY91)   [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ceva_ :     (SER5)   (ALA81)   [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Bacillus caldovelox [TaxId: 33931]
 d2zavb_ :     (GLY9)   (ASN90)   [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2phoa_ :     (THR7)   (GLY91)   [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Human (Homo sapiens) [TaxId: 9606]
 d3e8za_ :     (PRO7)   (VAL83)   [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Norway rat (Rattus norvegicus) [TaxId: 10116]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.42