Protein Concepts Dictionary

Tableau information

Concept source:  d3uxmd_  amino acid (a.a.) range (ASP130)(LEU205)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EHHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP130)  (ASP136) E1
	  (VAL139)  (ARG149) H2
	  (ASP153)  (GLU158) H3
	  (ARG160)  (ALA177) H4
	  (ARG180)  (ASP185) E5
	  (PRO189)  (LEU205) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
H2       88.6°   H2                                 
H3      -48.9° -135.8°   H3                          
H4     -139.7°  123.1° -100.4°   H4                   
E5      -18.7°   80.9°  -61.8° -133.3°   E5            
H6      167.2° -102.8°  118.6°   35.5°  168.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1n3bb_ :   (ASN125)  (GLN199)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Dephospho-CoA kinase |Escherichia coli [TaxId: 562]
 d1vhla_ :   (ASN125)  (GLN199)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Dephospho-CoA kinase |Escherichia coli [TaxId: 562]
 d4i1ub_ :   (ASP125)  (LYS201)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Burkholderia vietnamiensis [TaxId: 269482]
 d2zi9a_ :   (ASP173)  (LEU260)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Deoxycytidine kinase |Human (Homo sapiens) [TaxId: 9606]
 d3uxmd_ :   (ASP130)  (LEU205)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
 d3n2ib_ :   (ASP132)  (GLN208)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |automated matches |Vibrio cholerae [TaxId: 243277]
 d1g3ua_ :   (ASP134)  (LEU207)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Thymidylate kinase |Mycobacterium tuberculosis [TaxId: 1773]
 d1t3ha_ :   (ASN125)  (GLN199)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Dephospho-CoA kinase |Escherichia coli [TaxId: 562]
 d4edha_ :   (ASP130)  (ARG207)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
 d1ukea_ :   (LEU115)  (GLY193)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |UMP/CMP kinase |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
 d2wwfa_ :   (ASP130)  (ILE198)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37