Protein Concepts Dictionary

Tableau information

Concept source:  d2an9a_  amino acid (a.a.) range (ARG119)(ARG189)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EHHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ARG119)  (PRO125) E1
	  (SER127)  (GLY137) H2
	  (SER142)  (SER158) H3
	  (HIS159)  (ASP164) H4
	  (ASP164)  (ASP170) E5
	  (PHE172)  (ARG189) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
H2       89.2°   H2                                 
H3     -141.2°  129.0°   H3                          
H4     -138.9°   96.8°   44.2°   H4                   
E5      -25.7°   75.8° -144.2°  117.9°   E5            
H6      168.2° -102.6°   27.2°   40.4°  158.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1rkba_ :    (HIS90)  (ASP169)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Adenylate kinase |Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]
 d3cm0a_ :   (VAL109)  (LEU184)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Adenylate kinase |Thermus thermophilus [TaxId: 274]
 d2bklb2 :   (ALA607)  (ASP676)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Myxococcus xanthus [TaxId: 34]
 d2bkla2 :   (ALA607)  (ASP676)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Myxococcus xanthus [TaxId: 34]
 d3iima_ :    (HIS90)  (ASP169)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2an9a_ :   (ARG119)  (ARG189)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Guanylate kinase |Escherichia coli [TaxId: 562]
 d3dkra_ :   (PRO179)  (GLN239)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Lactobacillus rhamnosus [TaxId: 486408]
 d1teva_ :   (LEU118)  (GLY196)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |UMP/CMP kinase |Human (Homo sapiens) [TaxId: 9606]
 d3iija_ :    (HIS90)  (ASP169)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2qora_ :   (ILE120)  (SER189)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Plasmodium vivax [TaxId: 5855]
 d1zp6a1 :   (ARG105)  (GLN167)   [view usage] : c.37.1.25 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Atu3015-like |Hypothetical protein Atu3015 |Agrobacterium tumefaciens [TaxId: 358]
 d2if2a_ :   (ASP125)  (LEU192)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Aquifex aeolicus [TaxId: 224324]
 d4qa0b_ :    (PRO16)   (ALA68)   [view usage] : c.42.1.2 |Arginase/deacetylase |Arginase/deacetylase |Histone deacetylase, HDAC |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1xrja_ :   (GLN150)  (ASN230)   [view usage] : c.37.1.6 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Phosphoribulokinase/pantothenate kinase |Uridine-cytidine kinase 2 |Human (Homo sapiens) [TaxId: 9606]
 d1p4sa_ :   (VAL110)  (LEU179)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Adenylate kinase |Mycobacterium tuberculosis [TaxId: 1773]
 d2bwjf_ :   (GLN116)  (LEU198)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3trfb_ :   (VAL100)  (ILE172)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Coxiella burnetii [TaxId: 777]
 d3f0rb_ :    (PRO16)   (THR69)   [view usage] : c.42.1.2 |Arginase/deacetylase |Arginase/deacetylase |Histone deacetylase, HDAC |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1bvyf_ :   (TYR564)  (PHE628)   [view usage] : c.23.5.1 |Flavodoxin-like |Flavoproteins |Flavodoxin-related |FMN-binding domain of the cytochrome P450bm-3 |Bacillus megaterium [TaxId: 1404]
 d1vkhb_ :   (ASP202)  (ILE260)   [view usage] : c.69.1.32 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Putative serine hydrolase Ydr428c |Putative serine hydrolase Ydr428c |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.69,    c.42,    c.23,    c.37