Protein Concepts Dictionary

Tableau information

Concept source:  d4j6va_  amino acid (a.a.) range (ARG6)(MET114)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EHHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ARG6)   (ASN10) E1
	   (THR15)   (GLY33) H2
	   (GLY33)   (PHE48) H3
	   (SER62)   (ASN84) H4
	   (THR88)   (TRP94) E5
	  (SER110)  (MET114) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
H2     -112.4°   H2                                 
H3      -78.8°  -75.0°   H3                          
H4      109.0°   97.2°  170.9°   H4                   
E5      -25.8° -107.4°  -54.1°  134.2°   E5            
H6     -129.6°   29.4°  -63.2°  107.7° -112.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4p6rb_ :     (TYR5)  (MET114)   [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]
 d2zwea_ :     (THR2)  (LEU104)   [view usage] : a.86.1.3 |Di-copper centre-containing domain |Di-copper centre-containing domain |Tyrosinase |Tyrosinase |Streptomyces castaneoglobisporus [TaxId: 79261]
 d4j6tb_ :     (ARG6)  (MET114)   [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]
 d1wx2a_ :     (THR2)  (LEU104)   [view usage] : a.86.1.3 |Di-copper centre-containing domain |Di-copper centre-containing domain |Tyrosinase |Tyrosinase |Streptomyces castaneoglobisporus [TaxId: 79261]
 d4j6ub_ :     (TYR5)  (MET114)   [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]
 d3nq5a_ :     (ARG6)  (MET100)   [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]
 d4hd7a_ :     (ARG6)  (MET100)   [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]
 d3nm8a_ :     (TYR5)  (MET114)   [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]
 d4j6ua_ :     (TYR5)  (MET100)   [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]
 d4j6ta_ :     (TYR5)  (MET100)   [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]
 d4hd4b_ :     (ARG6)  (MET114)   [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]
 d4p6sa_ :     (TYR5)  (MET114)   [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]
 d2zmxa_ :     (THR2)  (LEU104)   [view usage] : a.86.1.3 |Di-copper centre-containing domain |Di-copper centre-containing domain |Tyrosinase |Tyrosinase |Streptomyces castaneoglobisporus [TaxId: 79261]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.86