Protein Concepts Dictionary

Tableau information

Concept source:  d2w9ra_  amino acid (a.a.) range (SER26)(LYS105)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EHHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER26)   (ASP36) E1
	   (PRO39)   (SER52) H2
	   (ASP54)   (GLY69) H3
	   (GLY69)   (GLY74) E4
	   (THR77)   (GLU96) H5
	   (LEU99)  (LYS105) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
H2      162.7°   H2                                 
H3      -69.8°  125.6°   H3                          
E4      146.9°  -16.1°  141.2°   E4                   
H5      -19.4°  144.6°  -81.3°  130.5°   H5            
E6      150.7°  -46.3°   86.7°  -61.2° -167.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3o1fb_ :    (SER26)  (LYS105)   [view usage] : d.45.1.2 |ClpS-like |ClpS-like |Adaptor protein ClpS (YljA) |Adaptor protein ClpS (YljA) |Escherichia coli [TaxId: 562]
 d3g3pa_ :    (SER39)  (LYS118)   [view usage] : d.45.1.0 |ClpS-like |ClpS-like |automated matches |automated matches |Caulobacter vibrioides [TaxId: 155892]
 d1mg9a_ :    (SER26)  (LYS105)   [view usage] : d.45.1.2 |ClpS-like |ClpS-like |Adaptor protein ClpS (YljA) |Adaptor protein ClpS (YljA) |Escherichia coli [TaxId: 562]
 d3gq0a_ :    (PRO38)  (LYS118)   [view usage] : d.45.1.2 |ClpS-like |ClpS-like |Adaptor protein ClpS (YljA) |automated matches |Caulobacter vibrioides [TaxId: 155892]
 d3o2oa_ :    (VAL30)  (LYS105)   [view usage] : d.45.1.2 |ClpS-like |ClpS-like |Adaptor protein ClpS (YljA) |Adaptor protein ClpS (YljA) |Escherichia coli [TaxId: 562]
 d1mbuc_ :    (SER26)  (LYS105)   [view usage] : d.45.1.2 |ClpS-like |ClpS-like |Adaptor protein ClpS (YljA) |Adaptor protein ClpS (YljA) |Escherichia coli [TaxId: 562]
 d1mbxc_ :    (PRO24)  (LYS105)   [view usage] : d.45.1.2 |ClpS-like |ClpS-like |Adaptor protein ClpS (YljA) |Adaptor protein ClpS (YljA) |Escherichia coli [TaxId: 562]
 d2w9ra_ :    (SER26)  (LYS105)   [view usage] : d.45.1.2 |ClpS-like |ClpS-like |Adaptor protein ClpS (YljA) |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1lzwa_ :     (PRO9)   (ALA91)   [view usage] : d.45.1.2 |ClpS-like |ClpS-like |Adaptor protein ClpS (YljA) |Adaptor protein ClpS (YljA) |Escherichia coli [TaxId: 562]
 d3g1ba_ :    (LEU40)  (LYS118)   [view usage] : d.45.1.0 |ClpS-like |ClpS-like |automated matches |automated matches |Caulobacter vibrioides [TaxId: 155892]
 d3g19a_ :    (LEU40)  (GLU117)   [view usage] : d.45.1.2 |ClpS-like |ClpS-like |Adaptor protein ClpS (YljA) |automated matches |Caulobacter vibrioides [TaxId: 155892]
 d3gq1a_ :    (LYS37)  (LYS118)   [view usage] : d.45.1.2 |ClpS-like |ClpS-like |Adaptor protein ClpS (YljA) |automated matches |Caulobacter vibrioides [TaxId: 155892]
 d3dnja_ :    (LEU40)  (LYS118)   [view usage] : d.45.1.2 |ClpS-like |ClpS-like |Adaptor protein ClpS (YljA) |automated matches |Caulobacter vibrioides [TaxId: 155892]
 d3g1bb_ :    (SER39)  (LYS118)   [view usage] : d.45.1.0 |ClpS-like |ClpS-like |automated matches |automated matches |Caulobacter vibrioides [TaxId: 155892]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.45