Tableau information
Concept source: d2prla_ amino acid (a.a.) range (ASP207)(THR283)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: EHHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP207) (VAL213) E1
(LEU221) (LYS227) H2
(LYS227) (GLY243) H3
(ALA251) (ALA257) E4
(THR261) (GLY276) H5
(ASP278) (THR283) E6
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -100.6° H2
H3 157.9° -92.3° H3
E4 -31.6° -112.8° 152.0° E4
H5 144.5° 66.8° -30.4° 176.1° H5
E6 -55.0° -132.6° 125.8° -26.4° 156.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1o68b_ : (MSE78) (GLY137) [view usage] : c.1.12.8 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Ketopantoate hydroxymethyltransferase PanB |Ketopantoate hydroxymethyltransferase PanB |Neisseria meningitidis [TaxId: 487]
d1ep3a_ : (ALA128) (ILE196) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Dihydroorotate dehydrogenase |Lactococcus lactis, isozyme B [TaxId: 1358]
d3bv4a_ : (THR226) (GLY302) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Fructose-1,6-bisphosphate aldolase |Rabbit (Oryctolagus cuniculus), muscle isozyme [TaxId: 9986]
d1gvia3 : (ASP323) (TYR377) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Maltogenic amylase, central domain |Thermus sp. [TaxId: 275]
d1ztva_ : (PHE105) (GLU169) [view usage] : c.1.32.1 |TIM beta/alpha-barrel |TM1631-like |TM1631-like |automated matches |Enterococcus faecalis [TaxId: 226185]
d1ep1a_ : (ALA128) (ILE196) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Dihydroorotate dehydrogenase |Lactococcus lactis, isozyme B [TaxId: 1358]
d2x42a1 : (ALA53) (LYS163) [view usage] : c.1.8.7 |TIM beta/alpha-barrel |(Trans)glycosidases |NagZ-like |Beta-glucosidase |Thermotoga neapolitana [TaxId: 309803]
d4wsoa_ : (PRO28) (VAL101) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
d1k1ea_ : (LYS9) (GLY80) [view usage] : c.108.1.5 |HAD-like |HAD-like |Probable phosphatase YrbI |Probable phosphatase YrbI |Haemophilus influenzae, HI1679 [TaxId: 727]
d2d4ec_ : (VAL166) (GLN226) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Thermus thermophilus [TaxId: 300852]
d3fzqa_ : (LYS5) (ALA65) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d4m1ra_ : (GLN18) (TRP96) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Soil metagenome [TaxId: 410658]
d2fpsb_ : (GLN4) (PRO95) [view usage] : c.108.1.19 |HAD-like |HAD-like |Histidinol phosphatase-like |Histidine biosynthesis bifunctional protein HisB, phosphatase domain |Escherichia coli [TaxId: 562]
d1wzcb_ : (MET1) (SER62) [view usage] : c.108.1.10 |HAD-like |HAD-like |Predicted hydrolases Cof |Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) |Pyrococcus horikoshii [TaxId: 53953]
d4ooua_ : (PHE276) (GLN342) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Cryptopygus antarcticus [TaxId: 187623]
d2x40a1 : (ALA53) (LYS163) [view usage] : c.1.8.7 |TIM beta/alpha-barrel |(Trans)glycosidases |NagZ-like |automated matches |Thermotoga neapolitana [TaxId: 309803]
d2qtma_ : (ARG2) (LEU74) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Nicotinamide mononucleotide (NMN) adenylyltransferase |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1xvib_ : (LEU8) (ALA70) [view usage] : c.108.1.10 |HAD-like |HAD-like |Predicted hydrolases Cof |Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) |Escherichia coli [TaxId: 562]
d2vsna2 : (VAL378) (PRO440) [view usage] : c.87.1.12 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |O-GlcNAc transferase, OGT |O-GlcNAc transferase, OGT |Xanthomonas campestris [TaxId: 314565]
d3amga_ : (ALA89) (THR170) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d3amga_ : (ASN190) (GLU287) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d2h29a_ : (LYS2) (ASP74) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Nicotinamide mononucleotide (NMN) adenylyltransferase |Staphylococcus aureus [TaxId: 1280]
d1tvna1 : (ASN18) (PHE99) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Endoglucanase Cel5a |Pseudoalteromonas haloplanktis [TaxId: 228]
d1m3ua_ : (LEU80) (GLY138) [view usage] : c.1.12.8 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Ketopantoate hydroxymethyltransferase PanB |Ketopantoate hydroxymethyltransferase PanB |Escherichia coli [TaxId: 562]
d1f9aa_ : (LEU1) (GLU76) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Nicotinamide mononucleotide (NMN) adenylyltransferase |Methanococcus jannaschii [TaxId: 2190]
d1k1eg_ : (LYS9) (GLY80) [view usage] : c.108.1.5 |HAD-like |HAD-like |Probable phosphatase YrbI |Probable phosphatase YrbI |Haemophilus influenzae, HI1679 [TaxId: 727]
d2fug12 : (GLN86) (ALA177) [view usage] : c.142.1.1 |Nqo1 FMN-binding domain-like |Nqo1 FMN-binding domain-like |Nqo1 FMN-binding domain-like |NADH-quinone oxidoreductase chain 1, Nqo1 |Thermus thermophilus [TaxId: 274]
d1treb_ : (HIS5) (ALA65) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Escherichia coli [TaxId: 562]
d1w0ma_ : (HIS136) (SER203) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Thermoproteus tenax [TaxId: 2271]
d3vavh_ : (LEU88) (GLY146) [view usage] : c.1.12.8 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Ketopantoate hydroxymethyltransferase PanB |automated matches |Burkholderia thailandensis [TaxId: 271848]
d1btca_ : (ASN10) (MET90) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |beta-Amylase |Soybean (Glycine max) [TaxId: 3847]
d3i9v11 : (GLN86) (GLY178) [view usage] : c.142.1.1 |Nqo1 FMN-binding domain-like |Nqo1 FMN-binding domain-like |Nqo1 FMN-binding domain-like |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d3pzua_ : (ALA56) (TRP130) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.108, c.82, c.26, c.87, c.142