Protein Concepts Dictionary

Tableau information

Concept source:  d1gpwb_  amino acid (a.a.) range (ASP44)(LYS112)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EHHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP44)   (GLY52) E1
	   (HIS53)   (ASP65) H2
	   (LEU66)   (GLU77) H3
	   (ARG78)   (CYS84) E4
	   (CYS84)   (LEU90) H5
	  (GLU107)  (LYS112) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
H2      134.1°   H2                                 
H3     -137.3°   88.4°   H3                          
E4      -18.2°  145.2° -124.6°   E4                   
H5      105.3°  -77.8°  -75.2° -118.1°   H5            
E6      -27.2°  135.2°  127.5°   14.2° -131.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1q7ra_ :    (ASP39)   (GLY90)   [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |Hypothetical protein YaaE |Bacillus stearothermophilus [TaxId: 1422]
 d1gpwd_ :    (ASP44)  (SER115)   [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF |Thermotoga maritima [TaxId: 2336]
 d2ywda_ :    (LYS41)  (ARG109)   [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |Hypothetical protein YaaE |Thermus thermophilus HB8 [TaxId: 300852]
 d2nv2l_ :    (GLY41)  (ARG106)   [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |automated matches |Bacillus subtilis [TaxId: 1423]
 d1ka9h_ :    (ASP42)  (ALA113)   [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF |Thermus thermophilus [TaxId: 274]
 d2ywja_ :    (ALA40)  (ASN102)   [view usage] : c.23.16.0 |Flavodoxin-like |Class I glutamine amidotransferase-like |automated matches |automated matches |Methanocaldococcus jannaschii [TaxId: 243232]
 d1kxja_ :    (ASP44)  (LYS112)   [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF |Thermotoga maritima [TaxId: 2336]
 d1kxjb_ :    (ASP44)  (LYS112)   [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF |Thermotoga maritima [TaxId: 2336]
 d1gpwb_ :    (ASP44)  (LYS112)   [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF |Thermotoga maritima [TaxId: 2336]
 d2nv2f_ :    (GLY41)  (ARG106)   [view usage] : c.23.16.1 |Flavodoxin-like |Class I glutamine amidotransferase-like |Class I glutamine amidotransferases (GAT) |automated matches |Bacillus subtilis [TaxId: 1423]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.23