Tableau information
Concept source: d1zzja_ amino acid (a.a.) range (ILE14)(VAL81)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: EHHEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ILE14) (PRO21) E1
(PRO21) (GLY30) H2
(GLN34) (GLY44) H3
(ALA45) (GLU51) E4
(ARG59) (GLY65) E5
(THR66) (VAL81) H6
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 118.2° H2
H3 153.0° 70.5° H3
E4 -39.7° -135.3° 150.4° E4
E5 156.5° 45.0° -26.2° 162.5° E5
H6 -13.5° 105.0° 149.7° -50.9° 143.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1tuaa2 : (ILE87) (GLY159) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Hypothetical protein APE0754 |Aeropyrum pernix [TaxId: 56636]
d2cpqa1 : (ALA218) (GLU280) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Fragile X mental retardation syndrome related protein 1, FXR1 |Human (Homo sapiens) [TaxId: 9606]
d1viga_ : (MET9) (GLU73) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Vigilin |Human (Homo sapiens) [TaxId: 9606]
d2hh3a_ : (GLY12) (ARG82) [view usage] : d.51.1.0 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2anna1 : (TYR6) (ILE76) [view usage] : d.51.1.0 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ztga_ : (LEU14) (ILE83) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2nn6g3 : (ASP195) (CYS256) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Ribosomal RNA-processing protein 40, RRP40 |Human (Homo sapiens) [TaxId: 9606]
d1x4ma1 : (PRO12) (ILE84) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Far upstream binding element, FBP |Mouse (Mus musculus) [TaxId: 10090]
d2ctea1 : (THR15) (ARG88) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Vigilin |Human (Homo sapiens) [TaxId: 9606]
d4a72b_ : (MET378) (GLY457) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Chromobacterium violaceum [TaxId: 536]
d1vw47_ : (ASN87) (PHE146) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, mitochondrial (54S or 39S subunit) |Saccharomyces cerevisiae [TaxId: 4932]
d2mjha_ : (ASP201) (PRO304) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |automated matches |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d2e3ua1 : (LYS33) (ARG102) [view usage] : d.51.1.0 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d2czvc1 : (LYS15) (LEU86) [view usage] : d.58.59.1 |Ferredoxin-like |Rnp2-like |Rpp14/Pop5-like |RNase P protein component 2, Rnp2 |Pyrococcus horikoshii [TaxId: 53953]
d2ctma1 : (VAL17) (ALA88) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Vigilin |Human (Homo sapiens) [TaxId: 9606]
d1j4wa2 : (PHE106) (ILE174) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Far upstream binding element, FBP |Human (Homo sapiens) [TaxId: 9606]
d1zzja_ : (ILE14) (VAL81) [view usage] : d.51.1.0 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2z0sa2 : (GLY149) (GLU212) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Exosome complex RNA-binding protein 1, ECR1 |Aeropyrum pernix [TaxId: 56636]
d2opua_ : (THR21) (GLY90) [view usage] : d.51.1.0 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2fm8a1 : (TRP53) (MET134) [view usage] : d.198.1.1 |Secretion chaperone-like |Type III secretory system chaperone-like |Type III secretory system chaperone |Surface presentation of antigens protein SpaK (Spa15) |Salmonella typhimurium [TaxId: 90371]
d2ctla1 : (PHE17) (MET91) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Vigilin |Human (Homo sapiens) [TaxId: 9606]
d2czvd_ : (LYS15) (VAL87) [view usage] : d.58.59.1 |Ferredoxin-like |Rnp2-like |Rpp14/Pop5-like |RNase P protein component 2, Rnp2 |Pyrococcus horikoshii [TaxId: 53953]
d1tuaa1 : (PRO3) (LEU71) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Hypothetical protein APE0754 |Aeropyrum pernix [TaxId: 56636]
d1wd6b_ : (THR3) (GLY77) [view usage] : d.58.4.12 |Ferredoxin-like |Dimeric alpha+beta barrel |Hypothetical protein YdhR |automated matches |Escherichia coli [TaxId: 562]
d2ekna_ : (PHE25) (VAL128) [view usage] : d.58.21.0 |Ferredoxin-like |Molybdenum cofactor biosynthesis protein C, MoaC |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d2av5a1 : (LYS15) (VAL87) [view usage] : d.58.59.1 |Ferredoxin-like |Rnp2-like |Rpp14/Pop5-like |RNase P protein component 2, Rnp2 |Pyrococcus furiosus [TaxId: 2261]
d1be3b2 : (SER251) (GLN349) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Cytochrome bc1 core subunit 2 |Cow (Bos taurus) [TaxId: 9913]
d1khma_ : (PRO12) (SER85) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |HnRNP K, KH3 |Human (Homo sapiens) [TaxId: 9606]
d2ba0a3 : (ARG138) (GLN198) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Exosome complex RNA-binding protein 1, ECR1 |Archaeoglobus fulgidus [TaxId: 2234]
d1we8a_ : (THR13) (ALA95) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Tudor and KH domain containing protein, Tdrkh |Mouse (Mus musculus) [TaxId: 10090]
d2pqub_ : (VAL12) (GLU81) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Poly(RC)-binding protein 2 |Human (Homo sapiens) [TaxId: 9606]
d1dtja_ : (MET4) (VAL76) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Neuro-oncological ventral antigen 2, nova-2, KH3 |Human (Homo sapiens) [TaxId: 9606]
d2axya1 : (LEU14) (GLU81) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Poly(RC)-binding protein 2 |Human (Homo sapiens) [TaxId: 9606]
d1zzjc_ : (ILE14) (VAL81) [view usage] : d.51.1.0 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2jzxa1 : (LEU14) (SER84) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Poly(RC)-binding protein 2 |Human (Homo sapiens) [TaxId: 9606]
d3vkec_ : (LEU14) (ASP82) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1j4wa1 : (HIS3) (GLN74) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Far upstream binding element, FBP |Human (Homo sapiens) [TaxId: 9606]
d1zzjb_ : (ILE14) (VAL81) [view usage] : d.51.1.0 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1j5ka_ : (PRO12) (SER85) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |HnRNP K, KH3 |Human (Homo sapiens) [TaxId: 9606]
d2axyc_ : (LEU14) (GLU81) [view usage] : d.51.1.1 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |Poly(RC)-binding protein 2 |Human (Homo sapiens) [TaxId: 9606]
d1zzia_ : (ILE14) (TYR84) [view usage] : d.51.1.0 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1zzib_ : (THR16) (TYR84) [view usage] : d.51.1.0 |Eukaryotic type KH-domain (KH-domain type I) |Eukaryotic type KH-domain (KH-domain type I) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.67, d.58, i.1, d.185, d.51, d.198