Tableau information
Concept source: d1b8aa2 amino acid (a.a.) range (PHE280)(GLN367)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: EHHEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PHE280) (SER284) E1
(SER284) (GLY296) H2
(ASP306) (GLU319) H3
(PRO324) (GLN330) E4
(ARG351) (TYR357) E5
(ILE362) (GLN367) E6
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 83.2° H2
H3 130.4° 90.9° H3
E4 -31.0° -114.0° 123.3° E4
E5 132.7° 51.4° -70.2° 162.7° E5
E6 -64.7° -139.6° 92.0° -36.5° 160.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2pkka_ : (ALA190) (GLY242) [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d1wydb2 : (ILE275) (ARG363) [view usage] : d.104.1.0 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d1x54a2 : (PHE279) (ARG364) [view usage] : d.104.1.0 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 53953]
d1asya2 : (MET397) (GLN484) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |Aspartyl-tRNA synthetase (AspRS) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1b8aa2 : (PHE280) (GLN367) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |Aspartyl-tRNA synthetase (AspRS) |Pyrococcus kodakaraensis [TaxId: 311400]
d11asa_ : (ASP163) (ILE254) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |Asparagine synthetase |Escherichia coli [TaxId: 562]
d3nela2 : (PHE280) (GLN367) [view usage] : d.104.1.0 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |automated matches |automated matches |Thermococcus kodakarensis [TaxId: 311400]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.72, d.104