Protein Concepts Dictionary

Tableau information

Concept source:  d2i6aa_  amino acid (a.a.) range (ASP218)(VAL284)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EHHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP218)  (GLY222) E1
	  (GLU224)  (GLY235) H2
	  (ASP240)  (LEU251) H3
	  (GLN259)  (THR265) E4
	  (THR271)  (THR275) E5
	  (GLU278)  (VAL284) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
H2      111.7°   H2                                 
H3      149.0°   61.6°   H3                          
E4      -14.3° -125.7°  148.7°   E4                   
E5      156.7°   46.2°  -37.1°  170.6°   E5            
E6      -45.6° -151.5°  126.2°  -31.7°  157.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4n09a_ :   (ASP217)  (PRO282)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Trypanosoma brucei [TaxId: 999953]
 d2c49b_ :   (ASN181)  (GLY237)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Methanococcus jannaschii [TaxId: 2190]
 d2r3ea_ :   (VAL148)  (GLY204)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Enterococcus faecalis [TaxId: 226185]
 d3otxb_ :   (ASP217)  (VAL283)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
 d2ax3a1 :   (SER359)  (ILE418)   [view usage] : c.72.1.4 |Ribokinase-like |Ribokinase-like |YjeF C-terminal domain-like |Hypothetical protein TM0922, C-terminal domain |Thermotoga maritima [TaxId: 2336]
 d2c49a_ :   (ASN181)  (GLY237)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Methanococcus jannaschii [TaxId: 2190]
 d3pzsa_ :   (ASP140)  (GLY214)   [view usage] : c.72.1.5 |Ribokinase-like |Ribokinase-like |PfkB-like kinase |automated matches |Yersinia pestis [TaxId: 214092]
 d4n09d_ :   (ASP217)  (PRO282)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Trypanosoma brucei [TaxId: 999953]
 d3pzsb_ :   (ASP140)  (GLY214)   [view usage] : c.72.1.5 |Ribokinase-like |Ribokinase-like |PfkB-like kinase |automated matches |Yersinia pestis [TaxId: 214092]
 d2r3ba_ :   (LYS147)  (GLY204)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Enterococcus faecalis [TaxId: 226185]
 d3kd6b_ :   (ASP168)  (PRO222)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Chlorobaculum tepidum [TaxId: 1097]
 d4n08a_ :   (ASP217)  (PRO282)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Trypanosoma brucei [TaxId: 999953]
 d3rrba2 :   (SER359)  (ILE418)   [view usage] : c.72.1.4 |Ribokinase-like |Ribokinase-like |YjeF C-terminal domain-like |Hypothetical protein TM0922, C-terminal domain |Thermotoga maritima [TaxId: 2336]
 d2r3bb_ :   (LYS147)  (GLY204)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Enterococcus faecalis [TaxId: 226185]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.72