Protein Concepts Dictionary

Tableau information

Concept source:  d2rhqa_  amino acid (a.a.) range (ILE286)(GLN342)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ILE286)  (MET291) E1
	  (ASN295)  (GLY301) H2
	  (GLY309)  (GLY315) E3
	  (GLY315)  (GLY325) H4
	  (ARG330)  (ASN335) H5
	  (ASP336)  (GLN342) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
H2      -66.9°   H2                                 
E3      164.5°  105.3°   E3                          
H4     -141.0° -134.4°   54.0°   H4                   
H5     -105.5°  -39.9°   70.5°   96.7°   H5            
H6      -63.7°  -92.7°  131.3°   81.0° -101.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1b70a_ :   (LYS276)  (LEU350)   [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS |Thermus thermophilus [TaxId: 274]
 d2rhsc_ :   (ILE286)  (GLN342)   [view usage] : d.104.1.0 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |automated matches |automated matches |Staphylococcus haemolyticus [TaxId: 1283]
 d3pcoc2 :   (LYS265)  (LYS327)   [view usage] : d.104.1.0 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d1eiya2 :   (LYS276)  (LEU350)   [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS |Thermus thermophilus [TaxId: 274]
 d3pcoa_ :   (LYS265)  (LYS327)   [view usage] : d.104.1.0 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d2rhqa_ :   (ILE286)  (GLN342)   [view usage] : d.104.1.0 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |automated matches |automated matches |Staphylococcus haemolyticus [TaxId: 1283]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.104