Protein Concepts Dictionary

Tableau information

Concept source:  d3k2wb_  amino acid (a.a.) range (MET253)(THR356)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EHEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (MET253)  (MET265) E1
	  (LEU270)  (PHE282) H2
	  (GLU293)  (HIS298) E3
	  (ASP303)  (GLY315) H4
	  (GLN334)  (GLY351) H5
	  (GLY351)  (THR356) E6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
H2     -152.6°   H2                                 
E3      -23.7° -161.8°   E3                          
H4      130.7°  -39.9°  153.1°   H4                   
H5      -39.7°  129.5°  -32.3° -149.5°   H5            
E6       89.1°  -92.5°  103.7°  -53.2° -128.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4jz6a_ :   (ARG246)  (CYS352)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
 d1nzwa_ :   (LYS272)  (CYS369)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
 d2o2pa_ :   (SER678)  (CYS774)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2d4ea_ :   (SER276)  (VAL372)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d3prld_ :   (LEU260)  (SER359)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Bacillus halodurans [TaxId: 86665]
 d1a4sa_ :   (SER268)  (CYS364)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Baltic cod (Gadus callarias) [TaxId: 8053]
 d1ky8a_ :   (ASP268)  (ALA364)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN |Thermoproteus tenax [TaxId: 2271]
 d3k2wb_ :   (MET253)  (THR356)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudoalteromonas atlantica [TaxId: 342610]
 d2esda_ :   (ILE247)  (LYS366)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |automated matches |Streptococcus mutans [TaxId: 1309]
 d2jg7a_ :   (ARG263)  (CYS368)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Acanthopagrus schlegeli [TaxId: 72011]
 d1uxva_ :   (GLY267)  (ALA364)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN |Thermoproteus tenax [TaxId: 2271]
 d1qi1a_ :   (ILE247)  (THR350)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Streptococcus mutans [TaxId: 1309]
 d3rhma_ :   (SER678)  (ASP793)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.82