Tableau information
Concept source: d1k7ya2 amino acid (a.a.) range (GLY747)(GLY825)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: EHEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY747) (THR753) E1
(ASP760) (ASN774) H2
(GLU776) (LEU780) E3
(PRO785) (VAL796) H4
(LEU800) (LEU806) E5
(SER810) (GLY825) H6
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -171.1° H2
E3 -21.6° -161.1° E3
H4 166.9° -7.8° 153.6° H4
E5 -23.8° 150.2° -45.2° 152.9° E5
H6 137.6° -48.8° 116.6° -45.7° 161.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4iv5d1 : (ARG52) (SER125) [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Trypanosoma cruzi [TaxId: 353153]
d3ga5a_ : (ILE5) (GLY74) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Galactose/glucose-binding protein |Salmonella typhimurium, strain lt2 [TaxId: 90371]
d1usga_ : (ILE3) (ALA85) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Leucine-binding protein |Escherichia coli [TaxId: 562]
d2aata_ : (LYS133) (THR208) [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Aspartate aminotransferase, AAT |Escherichia coli [TaxId: 562]
d1jsla_ : (ASN6) (THR108) [view usage] : c.88.1.1 |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Glutaminase/Asparaginase |Asparaginase type II |Erwinia chrysanthemi [TaxId: 556]
d2vzea_ : (ASP255) (GLN321) [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1bmta2 : (GLY747) (GLY825) [view usage] : c.23.6.1 |Flavodoxin-like |Cobalamin (vitamin B12)-binding domain |Cobalamin (vitamin B12)-binding domain |Methionine synthase, C-terminal domain |Escherichia coli [TaxId: 562]
d1cvra2 : (ALA145) (VAL227) [view usage] : c.17.1.2 |Caspase-like |Caspase-like |Gingipain R (RgpB), N-terminal domain |Gingipain R (RgpB), N-terminal domain |Porphyromonas gingivalis [TaxId: 837]
d3r5xd2 : (ARG2) (GLY78) [view usage] : c.30.1.2 |PreATP-grasp domain |PreATP-grasp domain |D-Alanine ligase N-terminal domain |D-Ala-D-Ala ligase, N-domain |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d2p0sb_ : (ASP48) (VAL110) [view usage] : c.94.1.3 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |PG0945 N-terminal domain-like |Uncharacterized protein PG0945 |Porphyromonas gingivalis [TaxId: 837]
d1k7ya2 : (GLY747) (GLY825) [view usage] : c.23.6.1 |Flavodoxin-like |Cobalamin (vitamin B12)-binding domain |Cobalamin (vitamin B12)-binding domain |Methionine synthase, C-terminal domain |Escherichia coli [TaxId: 562]
d2atca1 : (HIS41) (PHE118) [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
d3b7wa_ : (ASP255) (GLN321) [view usage] : e.23.1.0 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3bula2 : (GLY747) (GLY825) [view usage] : c.23.6.1 |Flavodoxin-like |Cobalamin (vitamin B12)-binding domain |Cobalamin (vitamin B12)-binding domain |Methionine synthase, C-terminal domain |Escherichia coli [TaxId: 562]
d1tugc1 : (LYS42) (GLY120) [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
d2d00b_ : (VAL4) (GLY70) [view usage] : c.149.1.1 |AtpF-like |AtpF-like |AtpF-like |automated matches |Thermus thermophilus [TaxId: 274]
d1iiba_ : (LYS4) (LEU71) [view usage] : c.44.2.1 |Phosphotyrosine protein phosphatases I-like |PTS system IIB component-like |PTS system, Lactose/Cellobiose specific IIB subunit |Enzyme IIB-cellobiose |Escherichia coli [TaxId: 562]
d2nzwc_ : (ALA183) (HIS258) [view usage] : c.87.1.11 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |FucT-like |Alpha1,3-fucosyltransferase FucT |Helicobacter pylori [TaxId: 210]
d4nf2a1 : (LYS47) (LYS120) [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Bacillus anthracis [TaxId: 261594]
d1i9ca_ : (LYS4) (LYS72) [view usage] : c.23.6.1 |Flavodoxin-like |Cobalamin (vitamin B12)-binding domain |Cobalamin (vitamin B12)-binding domain |Glutamate mutase, small subunit |Clostridium cochlearium [TaxId: 1494]
d3d6nb1 : (SER36) (LEU112) [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Aquifex aeolicus [TaxId: 63363]
d4iv5a1 : (ARG52) (ALA119) [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Trypanosoma cruzi [TaxId: 353153]
d1e1ca2 : (PRO598) (GLY676) [view usage] : c.23.6.1 |Flavodoxin-like |Cobalamin (vitamin B12)-binding domain |Cobalamin (vitamin B12)-binding domain |Methylmalonyl-CoA mutase alpha subunit, C-terminal domain |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
d1cb7a_ : (LYS4) (LYS72) [view usage] : c.23.6.1 |Flavodoxin-like |Cobalamin (vitamin B12)-binding domain |Cobalamin (vitamin B12)-binding domain |Glutamate mutase, small subunit |Clostridium cochlearium [TaxId: 1494]
d2iksa_ : (ARG62) (ARG136) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1ejba_ : (ILE17) (ASN111) [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1qp8a1 : (GLU125) (LEU199) [view usage] : c.2.1.4 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Formate/glycerate dehydrogenases, NAD-domain |Putative formate dehydrogenase |Pyrobaculum aerophilum [TaxId: 13773]
d3dlpx_ : (HIS196) (HIS264) [view usage] : e.23.1.1 |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |Acetyl-CoA synthetase-like |4-chlorobenzoyl CoA ligase |Alcaligenes sp. AL3007 [TaxId: 206162]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.67, c.94, c.2, c.93, c.23, c.87, e.23, c.78, c.16, c.88, c.30, c.44, c.17, c.149