Protein Concepts Dictionary

Tableau information

Concept source:  d2pfkd_  amino acid (a.a.) range (LYS2)(VAL57)

nSSEs in this Concept: 6

String of secondary struct.elems. (SSEs) defining this concept: EHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LYS2)    (THR8) E1
	   (GLY15)   (GLY31) H2
	   (GLU33)   (ASP39) E3
	   (TYR41)   (ASP47) H4
	   (ASP47)   (ASP53) E5
	   (ASP53)   (VAL57) H6

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                        
H2     -177.2°   H2                                 
E3      -24.8°  157.2°   E3                          
H4      132.9°  -47.6°  112.2°   H4                   
E5      111.0°  -66.7°  135.4° -102.4°   E5            
H6       25.3° -153.4°   49.0°  156.5°  -89.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2f48a_ :    (ASN74)  (TYR133)   [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |automated matches |Borrelia burgdorferi [TaxId: 224326]
 d2pfka_ :     (LYS2)   (MET60)   [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |ATP-dependent phosphofructokinase |Escherichia coli [TaxId: 562]
 d2pfkc_ :     (LYS2)   (MET60)   [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |ATP-dependent phosphofructokinase |Escherichia coli [TaxId: 562]
 d1mtoa_ :     (LYS2)   (HIS62)   [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |ATP-dependent phosphofructokinase |Bacillus stearothermophilus [TaxId: 1422]
 d1kzha_ :    (ASN74)  (ARG134)   [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |Pyrophosphate-dependent phosphofructokinase |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
 d3u39b_ :     (LYS2)   (ARG63)   [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |ATP-dependent phosphofructokinase |Bacillus stearothermophilus [TaxId: 1422]
 d2pfkd_ :     (LYS2)   (VAL57)   [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |ATP-dependent phosphofructokinase |Escherichia coli [TaxId: 562]
 d3u39a_ :     (LYS2)   (ILE60)   [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |ATP-dependent phosphofructokinase |Bacillus stearothermophilus [TaxId: 1422]
 d1pfka_ :     (LYS2)   (ASN62)   [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |ATP-dependent phosphofructokinase |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.89