Tableau information
Concept source: d1fqaa_ amino acid (a.a.) range (GLY5)(GLY74)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: EHEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY5) (ILE11) E1
(GLY16) (ASP30) H2
(ILE33) (HIS39) E3
(LYS42) (GLY54) H4
(ASP58) (TRP62) E5
(ALA63) (GLY74) H6
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 166.2° H2
E3 -21.8° 170.5° E3
H4 -147.1° -38.3° 132.6° H4
E5 -15.2° 151.0° -36.5° -146.9° E5
H6 130.4° -57.1° 113.6° -19.2° 135.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1n3wa_ : (LYS6) (GLY74) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d3pu5a_ : (ASP33) (LYS104) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Bordetella parapertussis [TaxId: 519]
d3waeb_ : (THR23) (GLY91) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermus thermophilus [TaxId: 262724]
d3gzga_ : (THR2) (GLY70) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Xanthomonas axonopodis [TaxId: 92829]
d1nl5a_ : (GLY5) (PHE67) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d1si0a_ : (ASN2) (ASP70) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Ferric-binding protein FbpA |Mannheimia haemolytica [TaxId: 75985]
d3k6ua_ : (GLU41) (MET107) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Methanosarcina acetivorans [TaxId: 2214]
d4ddda_ : (GLU30) (ALA99) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Ehrlichia chaffeensis [TaxId: 205920]
d3o9pa_ : (PRO356) (THR429) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Escherichia coli [TaxId: 562]
d4kd5a_ : (SER42) (LYS111) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d1anfa_ : (LYS6) (GLY74) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d1wdna_ : (LYS4) (ILE79) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamine-binding protein |Escherichia coli [TaxId: 562]
d3tcfa_ : (THR386) (LEU457) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2owsa_ : (ASP6) (GLY74) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Bordetella pertussis [TaxId: 257313]
d3waea_ : (PRO22) (GLY91) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermus thermophilus [TaxId: 262724]
d1xvxa_ : (GLY6) (LYS74) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Ferric-binding protein FbpA |Yersinia enterocolitica, YfuA [TaxId: 630]
d1atga_ : (GLU2) (ASN66) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Molybdate-binding protein, ModA |Azotobacter vinelandii [TaxId: 354]
d3puze_ : (GLY5) (PHE67) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d2ghaa_ : (PRO5) (GLY75) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d1xvya_ : (GLY3) (LYS71) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Ferric-binding protein FbpA |Serratia marcescens, SfuA [TaxId: 615]
d4kd5b_ : (SER42) (LYS111) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d1mg1a1 : (LYS7) (SER74) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d2h5yb_ : (THR6) (GLY70) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Xanthomonas axonopodis [TaxId: 190486]
d4ovja_ : (VAL48) (GLY122) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Alicyclobacillus acidocaldarius [TaxId: 521098]
d1r6za2 : (LYS5) (GLY73) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d3axfa_ : (GLY3) (LYS70) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1r6zz2 : (LYS5) (GLY73) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d1ggga_ : (LEU5) (ILE79) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamine-binding protein |Escherichia coli [TaxId: 562]
d3sewa_ : (GLY6) (PHE68) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d4r6ha_ : (LYS12) (TYR81) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
d3seya_ : (GLY6) (PHE68) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d1zbma1 : (LYS95) (GLY153) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Hypothetical protein AF1704 |Archaeoglobus fulgidus [TaxId: 2234]
d1eu8a_ : (GLY5) (GLY81) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Thermococcus litoralis [TaxId: 2265]
d1urdb_ : (THR31) (GLY104) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Alicyclobacillus acidocaldarius [TaxId: 405212]
d1i6aa_ : (GLY91) (PHE155) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Hydrogen peroxide-inducible genes LysR-type activator OxyR, regulatory domain |Escherichia coli [TaxId: 562]
d2fnca_ : (LYS6) (GLY75) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d3od7a_ : (ASP1) (GLY69) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Ferric-binding protein FbpA |Haemophilus influenzae [TaxId: 727]
d1r1na_ : (ASP1) (ASN69) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Ferric-binding protein FbpA |Neisseria gonorrhoeae [TaxId: 485]
d1sbpa_ : (ILE3) (GLY76) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Sulphate-binding protein |Salmonella typhimurium [TaxId: 90371]
d4rk9a_ : (VAL32) (TYR101) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Bacillus licheniformis [TaxId: 279010]
d4kd5d_ : (VAL43) (LYS111) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d3a3ua_ : (LEU97) (GLY155) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Hypothetical protein TTHA1568 |Thermus thermophilus [TaxId: 274]
d1amfa_ : (GLY3) (LYS70) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Molybdate-binding protein, ModA |Escherichia coli [TaxId: 562]
d1ursb_ : (THR31) (GLY104) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Alicyclobacillus acidocaldarius [TaxId: 405212]
d1mh3a2 : (GLY5) (GLY74) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d1suwa_ : (MET1) (GLN57) [view usage] : e.52.1.1 |NAD kinase/diacylglycerol kinase-like |NAD kinase/diacylglycerol kinase-like |NAD kinase-like |Inorganic polyphosphate/ATP-NAD kinase PpnK |Archaeoglobus fulgidus [TaxId: 2234]
d3seva_ : (GLY6) (GLY75) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d2h5ya_ : (THR2) (GLY70) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Xanthomonas axonopodis [TaxId: 190486]
d1d9ya_ : (ASP1) (ASN69) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Ferric-binding protein FbpA |Neisseria gonorrhoeae [TaxId: 485]
d1mdqa_ : (GLY5) (GLY74) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |D-maltodextrin-binding protein, MBP |Escherichia coli [TaxId: 562]
d4elqa_ : (PRO22) (GLY91) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d2hpgc_ : (TYR24) (GLY93) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d3uora_ : (THR28) (ASP99) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Xanthomonas axonopodis [TaxId: 190486]
d3lc8a_ : (GLY5) (GLY74) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94, e.52