Tableau information
Concept source: d1ii5a_ amino acid (a.a.) range (GLU118)(ASN173)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: EHEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU118) (VAL122) E1
(THR126) (GLN135) H2
(ASP137) (ASN142) E3
(LEU144) (LYS153) H4
(GLU157) (ASP162) E5
(ARG163) (ASN173) H6
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -159.0° H2
E3 -25.1° -170.1° E3
H4 -158.5° 42.5° 134.1° H4
E5 -33.5° 129.9° -57.4° -157.5° E5
H6 97.5° -103.4° 74.3° -61.0° 119.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3mpka_ : (ARG415) (PHE474) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Bordetella pertussis [TaxId: 257313]
d2ylna_ : (VAL157) (ASN213) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Neisseria gonorrhoeae [TaxId: 485]
d4h5fa_ : (ASN153) (ASN210) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 637987]
d3h7ma_ : (LYS164) (GLU220) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Geobacter sulfurreducens [TaxId: 35554]
d3n26a_ : (SER140) (VAL193) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Chlamydophila pneumoniae [TaxId: 83558]
d4ntla_ : (LYS32) (LYS99) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Enterococcus faecalis [TaxId: 226185]
d1wdna_ : (LYS110) (THR167) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamine-binding protein |Escherichia coli [TaxId: 562]
d4f3pb1 : (LYS133) (ASN190) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d1p99a_ : (LYS40) (HIS105) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Putative lipoprotein (NlpA family) |Staphylococcus aureus [TaxId: 1280]
d4f3pa1 : (LYS133) (ASN190) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d4mija_ : (LYS172) (LYS223) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |TRAP dicarboxylate transporter |Polaromonas [TaxId: 296591]
d1ggga_ : (GLY109) (THR167) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamine-binding protein |Escherichia coli [TaxId: 562]
d2y7ib_ : (LYS130) (PRO189) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]
d4pp0a_ : (LYS161) (LYS217) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
d3i6va_ : (GLY153) (GLU208) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Silicibacter pomeroyi [TaxId: 89184]
d4gota_ : (GLU32) (GLU97) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
d4kpta_ : (LYS135) (GLN194) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Lactococcus lactis [TaxId: 272623]
d2y7ia_ : (LYS130) (PRO189) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Salmonella typhimurium [TaxId: 90371]
d3delb_ : (ARG142) (VAL195) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Chlamydia trachomatis [TaxId: 813]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94