Tableau information
Concept source: d3ay6a_ amino acid (a.a.) range (VAL9)(GLY84)
nSSEs in this Concept: 6
String of secondary struct.elems. (SSEs) defining this concept: EHEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL9) (THR13) E1
(LEU19) (GLU31) H2
(LYS33) (TYR39) E3
(GLU42) (GLY56) H4
(GLN58) (GLN63) E5
(GLU69) (GLY84) H6
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -170.7° H2
E3 -15.4° -165.8° E3
H4 149.3° -28.0° 164.6° H4
E5 -32.2° 154.3° -19.4° 166.7° E5
H6 156.8° -14.0° 157.1° -30.8° 158.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1bvra_ : (ILE10) (ILE82) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
d4bmsk_ : (LYS7) (LEU70) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Ralstonia sp. [TaxId: 517192]
d1qyia_ : (ASP317) (ASN375) [view usage] : c.108.1.13 |HAD-like |HAD-like |Hypothetical protein MW1667 (SA1546) |Hypothetical protein MW1667 (SA1546) |Staphylococcus aureus [TaxId: 1280]
d1rkua_ : (ARG146) (ALA198) [view usage] : c.108.1.11 |HAD-like |HAD-like |Homoserine kinase ThrH |Homoserine kinase ThrH |Pseudomonas aeruginosa [TaxId: 287]
d2ztma_ : (VAL6) (LEU73) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Pseudomonas fragi [TaxId: 296]
d1xzpa2 : (ASP293) (THR371) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |TrmE GTPase domain |Thermotoga maritima [TaxId: 2336]
d4ibod_ : (ARG12) (GLY86) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Agrobacterium fabrum [TaxId: 176299]
d3caea_ : (ILE65) (GLU135) [view usage] : c.52.1.17 |Restriction endonuclease-like |Restriction endonuclease-like |Endonuclease I (Holliday junction resolvase) |automated matches |Bacteriophage T7 [TaxId: 10760]
d1m0da_ : (ILE62) (GLU132) [view usage] : c.52.1.17 |Restriction endonuclease-like |Restriction endonuclease-like |Endonuclease I (Holliday junction resolvase) |Endonuclease I (Holliday junction resolvase) |Bacteriophage T7 [TaxId: 10760]
d2d5aa_ : (GLU79) (GLY142) [view usage] : c.2.1.8 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |CoA-binding domain |Hypothetical protein PH1109 |Pyrococcus horikoshii [TaxId: 53953]
d1qo0d_ : (ASP54) (HIS160) [view usage] : c.23.1.3 |Flavodoxin-like |CheY-like |Positive regulator of the amidase operon AmiR |Positive regulator of the amidase operon AmiR |Pseudomonas aeruginosa [TaxId: 287]
d3oidb_ : (LYS5) (GLU78) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d2qxya_ : (ASP50) (ILE119) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d1ezra_ : (LYS4) (SER115) [view usage] : c.70.1.1 |Nucleoside hydrolase |Nucleoside hydrolase |Nucleoside hydrolase |Nucleoside hydrolase |Leishmania major [TaxId: 5664]
d1orda1 : (GLY34) (LEU107) [view usage] : c.23.1.4 |Flavodoxin-like |CheY-like |Ornithine decarboxylase N-terminal "wing" domain |Ornithine decarboxylase N-terminal "wing" domain |Lactobacillus sp., strain 30a [TaxId: 1591]
d4igia_ : (GLN1131) (LEU1205) [view usage] : c.62.1.0 |vWA-like |vWA-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4iuya_ : (LYS9) (GLY84) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Acinetobacter baumannii [TaxId: 405416]
d4iuyc_ : (LYS9) (ALA82) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Acinetobacter baumannii [TaxId: 405416]
d4ibob_ : (ARG12) (GLY86) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Agrobacterium fabrum [TaxId: 176299]
d1vl2b1 : (GLU3) (THR68) [view usage] : c.26.2.1 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |N-type ATP pyrophosphatases |Argininosuccinate synthetase, N-terminal domain |Thermotoga maritima [TaxId: 2336]
d1roza_ : (LYS274) (GLU353) [view usage] : c.31.1.1 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Deoxyhypusine synthase, DHS |Deoxyhypusine synthase, DHS |Human (Homo sapiens) [TaxId: 9606]
d2odpa1 : (ARG348) (LEU433) [view usage] : c.62.1.0 |vWA-like |vWA-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1hi9a_ : (GLY97) (GLN203) [view usage] : c.99.1.1 |Dipeptide transport protein |Dipeptide transport protein |Dipeptide transport protein |Zn-dependent D-aminopeptidase DppA |Bacillus subtilis [TaxId: 1423]
d1kjna_ : (PHE81) (MSE153) [view usage] : c.115.1.1 |Hypothetical protein MTH777 (MT0777) |Hypothetical protein MTH777 (MT0777) |Hypothetical protein MTH777 (MT0777) |Hypothetical protein MTH777 (MT0777) |Methanobacterium thermoautotrophicum [TaxId: 145262]
d2i6qa1 : (ARG348) (LEU433) [view usage] : c.62.1.0 |vWA-like |vWA-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ujma_ : (SER13) (LYS83) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Aldehyde reductase II |Sporobolomyces salmonicolor [TaxId: 5005]
d4ihka_ : (GLN1131) (ILE1194) [view usage] : c.62.1.0 |vWA-like |vWA-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1y81a1 : (ASP63) (THR121) [view usage] : c.2.1.8 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |CoA-binding domain |Hypothetical protein PF0725 |Pyrococcus furiosus [TaxId: 2261]
d1gqyb1 : (GLN19) (GLU76) [view usage] : c.5.1.1 |MurCD N-terminal domain |MurCD N-terminal domain |MurCD N-terminal domain |UDP-N-acetylmuramate-alanine ligase MurC |Haemophilus influenzae [TaxId: 727]
d2fcaa1 : (PRO40) (PHE104) [view usage] : c.66.1.53 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |TrmB-like |tRNA (guanine-N(7)-)-methyltransferase TrmB |Bacillus subtilis [TaxId: 1423]
d4iboa_ : (ARG12) (GLY86) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Agrobacterium fabrum [TaxId: 176299]
d3cz5b_ : (ASP53) (GLY125) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Aurantimonas sp. [TaxId: 314269]
d3pjda_ : (ARG8) (GLY79) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3lrpa_ : (ASP86) (ASN179) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.2, c.108, c.26, c.66, c.23, c.37, c.31, c.62, c.52, c.5, c.70, c.99, c.115